RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 FMO2Q99518 471 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CBWD1Q9BRT8 395 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 KDM4CQ9H3R0 1056 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 C17orf75Q9HAS0 396 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TMEM8AQ9HCN3 771 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 AVENQ9NQS1 362 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 AAASQ9NRG9 546 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 GTF3C4Q9UKN8 822 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ARHGEF35A5YM69 484 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 NDUFAB1O14561 156 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 WDR46O15213 610 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 SHBGP04278 402 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CYP1A1P04798 512 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 RARGP13631 454 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 COMTP21964 271 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 COILP38432 576 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 QARSP47897 775 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 MARCKSL1P49006 195 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CYP2J2P51589 502 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SEC24CP53992 1094 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 DHX9Q08211 1270 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 UGCGQ16739 394 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ACAD10Q6JQN1 1059 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 HAUS6Q7Z4H7 955 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CROCCP2Q86T23 111 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SLC13A5Q86YT5 568 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 SPICE1Q8N0Z3 855 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 LARGE2Q8N3Y3 721 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 UBR7Q8N806 425 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 PROCA1Q8NCQ7 364 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 MAGEC3Q8TD91 643 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SYTL5Q8TDW5 730 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 PARD3BQ8TEW8 1205 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CCT6BQ92526 530 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 IWS1Q96ST2 819 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 KIAA1683Q9H0B3 1180 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 UBE2TQ9NPD8 197 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 EURLQ9NYK6 297 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 WHRNQ9P202 907 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 LARSQ9P2J5 1176 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 PARP2Q9UGN5 583 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TBX20Q9UMR3 447 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TISP43B9A030 160 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ANKRD63C9JTQ0 380 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 BACH1O14867 736 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 EXOC3O60645 756 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ERLIN2O94905 339 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CCNE2O96020 404 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 AGTP01019 485 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 PIGRP01833 764 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 PYGMP11217 842 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SCP2P22307 547 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 HNRNPH1P31943 449 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 YWHABP31946 246 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 SFNP31947 248 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 HSPA1LP34931 641 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 JAK3P52333 1124 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SMTNP53814 917 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 GCNT1Q02742 428 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CBLBQ13191 982 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 KLF1Q13351 362 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 ENOX2Q16206 610 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 CLEC16AQ2KHT3 1053 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 AADACL2Q6P093 401 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CCDC174Q6PII3 467 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SYDE1Q6ZW31 735 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 MICALCLQ6ZW33 695 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TAS1R3Q7RTX0 852 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 MIER3Q7Z3K6 550 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 MCF2L2Q86YR7 1114 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 OGFOD1Q8N543 542 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 UBL4BQ8N7F7 174 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 LPAR1Q92633 364 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 C18orf8Q96DM3 657 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 AGBL1Q96MI9 1066 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 GLIS2Q9BZE0 524 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 OSBPL7Q9BZF2 842 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ROPN1BQ9BZX4 212 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 ROPN1Q9HAT0 212 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 PNMA2Q9UL42 364 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TRPC6Q9Y210 931 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SAMM50Q9Y512 469 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 DICER1Q9UPY3 1922 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 MYPNQ86TC9 1320 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 OTOFQ9HC10 1997 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 K7ENM7 598 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 PPIP5K2O43314 1243 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 RIPK2O43353 540 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 CAND2O75155 1236 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 DNAJC8O75937 253 aaPredicted RBP4.15□□□□□ -1.74
RTN4-209ENST00000405240 RARAP10276 462 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 KRT13P13646 458 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 CYP11B1P15538 503 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 GARTP22102 1010 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 PSMC5P62195 406 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 ITIH4Q14624 930 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 UBAP2Q5T6F2 1119 aaKnown RBP4.15□□□□□ -1.74
RTN4-209ENST00000405240 ICE2Q659A1 982 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 ZNF746Q6NUN9 644 aaPredicted RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms