RNA–Protein interactions for RNA: ENST00000402415.7

OTOF-204, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 5,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-204ENST00000402415 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 ZNF654Q8IZM8 581 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 GIPC2Q8TF65 315 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 OMA1Q96E52 524 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
OTOF-204ENST00000402415 EDEM3Q9BZQ6 932 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 ANGPTL3Q9Y5C1 460 aa12.8□□□□□ -0.36
OTOF-204ENST00000402415 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 PARD3BQ8TEW8 1205 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 PYROXD1Q8WU10 500 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 SNX25Q9H3E2 840 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 POLE3Q9NRF9 147 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 GGT7Q9UJ14 662 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CLPTM1O96005 669 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 ST13P50502 369 aaKnown RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 NSL1Q96IY1 281 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 IRX2Q9BZI1 471 aaPredicted RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 SGK1O00141 431 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 LCA5LO95447 670 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 MTF1Q14872 753 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 PPP1R14BQ96C90 147 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CAPN9O14815 690 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 KBTBD12Q3ZCT8 623 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 FAM43BQ6ZT52 329 aaPredicted RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 FRA10AC1Q70Z53 315 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 ERO1BQ86YB8 467 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
OTOF-204ENST00000402415 TBC1D7Q9P0N9 293 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
OTOF-204ENST00000402415 SASH3O75995 380 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 GYG1P46976 350 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 PCGF5Q86SE9 256 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 ZNF554Q86TJ5 538 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 CAVIN3Q969G5 261 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 TMBIM4Q9HC24 238 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 TSPAN9O75954 239 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 FLOT2Q14254 428 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 THEMIS2Q5TEJ8 643 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 NMD3Q96D46 503 aaKnown RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 ZNF446Q9NWS9 450 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 R3HDM2Q9Y2K5 976 aaKnown RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 USP17L21D6R901 530 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 MYBL2P10244 700 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 ACAD11Q709F0 780 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 GRAMD1CQ8IYS0 662 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 MLXIPLQ9NP71 852 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
OTOF-204ENST00000402415 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 SH3GLB1Q9Y371 365 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 CBFA2T3O75081 653 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 CDH16O75309 829 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 RARBP10826 455 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 GSTT1P30711 240 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 S100A5P33763 92 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 BPIFB4P59827 614 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 PCNX4Q63HM2 1172 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 NECAB2Q7Z6G3 386 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 FANCBQ8NB91 859 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 ANKZF1Q9H8Y5 726 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
OTOF-204ENST00000402415 DAPK3O43293 454 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.36
OTOF-204ENST00000402415 ZCCHC18P0CG32 403 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 MAPK4P31152 587 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 LBX1P52954 281 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 RAD21L1Q9H4I0 556 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.36
OTOF-204ENST00000402415 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 GINS2Q9Y248 185 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.36
OTOF-204ENST00000402415 COPG1Q9Y678 874 aaKnown RBP12.77□□□□□ -0.36
OTOF-204ENST00000402415 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms