RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LDHAP00338 332 aaKnown RBP27.81■■■□□ 2.04
CPNE1-205ENST00000401607 GTF2H1P32780 548 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 TERF1P54274 439 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 WNT7BP56706 349 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 MAP2K1Q02750 393 aaPredicted RBP27.81■■■□□ 2.04
CPNE1-205ENST00000401607 MBTD1Q05BQ5 628 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 PSMD6Q15008 389 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 KRT39Q6A163 491 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 ZNF662Q6ZS27 426 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 USP37Q86T82 979 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 KAT2BQ92831 832 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 WDR24Q96S15 920 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 STK33Q9BYT3 514 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 GPR88Q9GZN0 384 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 IFT122Q9HBG6 1241 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 GABRQQ9UN88 632 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 COQ4Q9Y3A0 265 aa27.81■■■□□ 2.04
CPNE1-205ENST00000401607 ABLIM1O14639 778 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 TOM1L1O75674 476 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 MATR3P43243 847 aaKnown RBP eCLIP27.8■■■□□ 2.04
CPNE1-205ENST00000401607 POU5F1BQ06416 359 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 KLHL30Q0D2K2 578 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 MINDY3Q9H8M7 445 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 Q9Y3F1 56 aa27.8■■■□□ 2.04
CPNE1-205ENST00000401607 RCCD1A6NED2 376 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 F8VZ95 297 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 ACKR2O00590 384 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 RIOK3O14730 519 aaKnown RBP27.79■■■□□ 2.04
CPNE1-205ENST00000401607 PNMA6AP0CW24 399 aaPredicted RBP27.79■■■□□ 2.04
CPNE1-205ENST00000401607 DLATP10515 647 aaKnown RBP27.79■■■□□ 2.04
CPNE1-205ENST00000401607 CLDN10P78369 228 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 SPA17Q15506 151 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 TRPV1Q8NER1 839 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 SEMA4DQ92854 862 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 CAPNS2Q96L46 248 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 HAUS4Q9H6D7 363 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 TRIM10Q9UDY6 481 aa27.79■■■□□ 2.04
CPNE1-205ENST00000401607 RBAK-RBAKDNI3L0D1 243 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 INO80B-WBP1J3KQ70 363 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 CLDN3O15551 220 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 FAM189A1O60320 539 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 RFX1P22670 979 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 PRKCIP41743 596 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 GFPT1Q06210 699 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 DRAP1Q14919 205 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 KIAA1328Q86T90 577 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 IFNLR1Q8IU57 520 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 ARHGEF19Q8IW93 802 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 INO80BQ9C086 356 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 AKT3Q9Y243 479 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 TULP1O00294 542 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 PROZP22891 400 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 TMOD1P28289 359 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 STAT1P42224 750 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 VAV2P52735 878 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 ENOX2Q16206 610 aaKnown RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 DEFB115Q30KQ5 88 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 SV2AQ7L0J3 742 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 ZNF516Q92618 1163 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 LACRTQ9GZZ8 138 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 SETD4Q9NVD3 440 aa27.78■■■□□ 2.04
CPNE1-205ENST00000401607 RBAKQ9NYW8 714 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-205ENST00000401607 A0A087WZ62 844 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 KIF5CO60282 957 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 TBC1D8O95759 1140 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 VTNP04004 478 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 IQCF3P0C7M6 154 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 HARSP12081 509 aaKnown RBP27.77■■■□□ 2.04
CPNE1-205ENST00000401607 SOX5P35711 763 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 PHKA2P46019 1235 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 CAP1Q01518 475 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 HSP90AA2PQ14568 343 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-205ENST00000401607 KIAA0753Q2KHM9 967 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 C15orf39Q6ZRI6 1047 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 TSHZ1Q6ZSZ6 1077 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 TAS1R2Q8TE23 839 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 LMBR1Q8WVP7 490 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 TRIB2Q92519 343 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 JAKMIP2Q96AA8 810 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 FAM84AQ96KN4 292 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 FDXACB1Q9BRP7 624 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-205ENST00000401607 PTPRHQ9HD43 1115 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 PCDHA13Q9Y5I0 950 aa27.77■■■□□ 2.04
CPNE1-205ENST00000401607 RRN3P2A6NIE6 340 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 B4GALT5O43286 388 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 FLT3LGP49771 235 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 CPT1AP50416 773 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 PTK2Q05397 1052 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 MCL1Q07820 350 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 SEZ6Q53EL9 994 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 ZBTB33Q86T24 672 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 MYRIPQ8NFW9 859 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 PPP1R16BQ96T49 567 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 AP5M1Q9H0R1 490 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 PDE11AQ9HCR9 933 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 GFPT2O94808 682 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 SMIM10L2AP0DMW4 78 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 SMIM10L2BP0DMW5 78 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 AKR1A1P14550 325 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 FERP16591 822 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms