RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 OCRLQ01968 901 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 ZC2HC1CQ53FD0 456 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 WDR75Q8IWA0 830 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 SLC30A5Q8TAD4 765 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 CTIFO43310 598 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 NR1H3Q13133 447 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 NOP9Q86U38 636 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 SNF8Q96H20 258 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 ACAP3Q96P50 834 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 SLC8A2Q9UPR5 921 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 ITIH6Q6UXX5 1313 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 HNRNPH2P55795 449 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 ROR1Q01973 937 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 RBM46Q8TBY0 533 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 MAP3K14Q99558 947 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 TMEM39BQ9GZU3 492 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 PPARGC1AQ9UBK2 798 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 REREQ9P2R6 1566 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 PLA2G4FQ68DD2 849 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 PDCD6IPQ8WUM4 868 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 KAZALD1Q96I82 304 aa19.31■□□□□ 0.68
COL18A1-204ENST00000400337 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.31■□□□□ 0.68
COL18A1-204ENST00000400337 C19orf81C9J6K1 198 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 AP1B1Q10567 949 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 PDE1CQ14123 709 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 EFHC2Q5JST6 749 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ANGEL2Q5VTE6 544 aaKnown RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 C1orf228Q6PIY5 440 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 SYT2Q8N9I0 419 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ZBED2Q9BTP6 218 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 TROAPQ12815 778 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 SNRNP35Q16560 246 aaKnown RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 IZUMO3Q5VZ72 239 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 FGD4Q96M96 766 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 LRRC1Q9BTT6 524 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 FBXL5Q9UKA1 691 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 CHEK2O96017 543 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 BRAFP15056 766 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 TAC1P20366 129 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 GALCP54803 685 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 PPP2R2AP63151 447 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 EFHD1Q9BUP0 239 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 MOCS2O96007 188 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 PAPOLAP51003 745 aaKnown RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ANKRD20A4Q4UJ75 823 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ANKRD20A8PQ5CZ79 823 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ANKRD20A2Q5SQ80 823 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ANKRD20A1Q5TYW2 823 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 SPATA31A6Q5VVP1 1343 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 RASGRP2Q7LDG7 609 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 ZC3H18Q86VM9 953 aaKnown RBP19.3■□□□□ 0.68
COL18A1-204ENST00000400337 MS4A14Q96JA4 679 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 MAD2L2Q9UI95 211 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 DCTN3O75935 186 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 VSNL1P62760 191 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 CDC26Q8NHZ8 85 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 URGCPQ8TCY9 931 aa19.3■□□□□ 0.68
COL18A1-204ENST00000400337 SSU72P8A0A1W2PR75 194 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 KIAA0391O15091 583 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 GUCY2CP25092 1073 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 PPARGP37231 505 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 YWHAHQ04917 246 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 SLC35G2Q8TBE7 412 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 AFG1LQ8WV93 481 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 EDRF1Q3B7T1 1238 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 INTS5Q6P9B9 1019 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 TC2NQ8N9U0 490 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 SEPT1Q8WYJ6 367 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 SIK2Q9H0K1 926 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 TRIM10Q9UDY6 481 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 FHOD1Q9Y613 1164 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 GSTA4O15217 222 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 TADA3O75528 432 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 SMAD1Q15797 465 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 OR6J1Q8NGC5 347 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 CPA5Q8WXQ8 436 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 ALKBH8Q96BT7 664 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 ZNF560Q96MR9 790 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 KCND2Q9NZV8 630 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 PIN4Q9Y237 131 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 PIK3R2O00459 728 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 LCP1P13796 627 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 SLC9A1P19634 815 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 KRT17Q04695 432 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 DHX34Q14147 1143 aaKnown RBP19.29■□□□□ 0.68
COL18A1-204ENST00000400337 IFT43Q96FT9 208 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 KLHL11Q9NVR0 708 aa19.29■□□□□ 0.68
COL18A1-204ENST00000400337 UBE2Q2LH0YL09 131 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 TAP1Q03518 808 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 MFSD14CQ5VZR4 134 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 RAD9BQ6WBX8 426 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 LRRC43Q8N309 656 aa19.28■□□□□ 0.68
COL18A1-204ENST00000400337 SPDYE1Q8NFV5 336 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms