RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 TTLL4Q14679 1199 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SMTNL2Q2TAL5 461 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PRR5LQ6MZQ0 368 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ARMCX2Q7L311 632 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CRLF3Q8IUI8 442 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 GUF1Q8N442 669 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 SLC35G2Q8TBE7 412 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 NEK9Q8TD19 979 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CCHCR1Q8TD31 782 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 EXT2Q93063 718 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 AGAP3Q96P47 875 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 LRRC37BQ96QE4 947 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 KIFC3Q9BVG8 833 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PLA2G12BQ9BX93 195 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SIK2Q9H0K1 926 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 EPB41L4AQ9HCS5 686 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 GINM1Q9NU53 330 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SLC9A2Q9UBY0 812 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PRR12Q9ULL5 1215 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CACNA1BQ00975 2339 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 NRXN1Q9ULB1 1477 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 BTAF1O14981 1849 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SLIT1O75093 1534 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MEGF6O75095 1541 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MROH1Q8NDA8 1641 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 SPAG7O75391 227 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 GRAP2O75791 330 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 GYPCP04921 128 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 CSF1RP07333 972 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 PDGFRBP09619 1106 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 HNRNPH2P55795 449 aaKnown RBP3.46□□□□□ -1.85
KNL1-202ENST00000399668 PSMC1P62191 440 aaKnown RBP3.46□□□□□ -1.85
KNL1-202ENST00000399668 COG7P83436 770 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 THOC5Q13769 683 aaKnown RBP3.46□□□□□ -1.85
KNL1-202ENST00000399668 ARL13BQ3SXY8 428 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 CDC42EP5Q6NZY7 148 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 FRMD5Q7Z6J6 570 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 ZNF34Q8IZ26 560 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 CEP120Q8N960 986 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 HIPK4Q8NE63 616 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 AGR3Q8TD06 166 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 EXOC4Q96A65 974 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 ALKBH8Q96BT7 664 aaKnown RBP3.46□□□□□ -1.85
KNL1-202ENST00000399668 PHF20Q9BVI0 1012 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 WNT8AQ9H1J5 351 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 GOLPH3Q9H4A6 298 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 TBC1D22BQ9NU19 505 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 MRFAP1Q9Y605 127 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 DUSP10Q9Y6W6 482 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 SPATA31A1Q5TZJ5 1347 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 CNTNAP5Q8WYK1 1306 aa3.46□□□□□ -1.85
KNL1-202ENST00000399668 ZDBF2Q9HCK1 2354 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 A0A0G2JND7 137 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 P4HBP07237 508 aaKnown RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 GNAT1P11488 350 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 SOX5P35711 763 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 OCRLQ01968 901 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 CACNB2Q08289 660 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 DPYDQ12882 1025 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 STK4Q13043 487 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 KCNB1Q14721 858 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 JADE1Q6IE81 842 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 FAM47EQ6ZV65 393 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 KDELC2Q7Z4H8 507 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ZNF280CQ8ND82 737 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 KAZALD1Q96I82 304 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ALDH8A1Q9H2A2 487 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 PARVAQ9NVD7 372 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 CHORDC1Q9UHD1 332 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 HPS5Q9UPZ3 1129 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 MGAMO43451 1857 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 PI4K2BG5E9Z4 385 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 POLRMTO00411 1230 aaKnown RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 PLEKP08567 350 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 FGFR4P22455 802 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 XPAP23025 273 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 PHKA2P46019 1235 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ARSEP51690 589 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 EIF3BP55884 814 aaKnown RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 KIF19Q2TAC6 998 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 KLC3Q6P597 504 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 EMBQ6PCB8 327 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 PDCD7Q8N8D1 485 aaKnown RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 NEDD1Q8NHV4 660 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 CHMP6Q96FZ7 201 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 LRRC1Q9BTT6 524 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 PRDM5Q9NQX1 630 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 RNF181Q9P0P0 153 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 PPME1Q9Y570 386 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ANGPTL3Q9Y5C1 460 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 WDR87Q6ZQQ6 2873 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 CCDC195A0A1B0GUA6 201 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 RSPH10B2B2RC85 870 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 KCNN4O15554 427 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 DIAPH2O60879 1101 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 RSPH10BP0C881 870 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ESRRAP11474 423 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 TBXAS1P24557 533 aaPredicted RBP3.46□□□□□ -1.86
KNL1-202ENST00000399668 SMARCA1P28370 1054 aa3.46□□□□□ -1.86
KNL1-202ENST00000399668 ELF1P32519 619 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms