RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	RGS5	O15539	181 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	ACSL3	O95573	720 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	ACADM	P11310	421 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	RHPN2	Q8IUC4	686 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	TRIM48	Q8IWZ4	208 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	TSPYL6	Q8N831	410 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	NT5C1B	Q96P26	610 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	AP1M1	Q9BXS5	423 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644		A0A087X0T9	212 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	MFAP3	P55082	362 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	KRT76	Q01546	638 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	SYT2	Q8N9I0	419 aa	Predicted RBP	11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	RMDN3	Q96TC7	470 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	CBX8	Q9HC52	389 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	IPP	Q9Y573	584 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	ADGRA2	Q96PE1	1338 aa		11.77	□□□□□ -0.52
CACNA1C-218	ENST00000399644	STAG3L1	P0CL83	205 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TMED10	P49755	219 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	PSMC5	P62195	406 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	YWHAZ	P63104	245 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	COX10	Q12887	443 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ANKRD40	Q6AI12	368 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TMEM179	Q6ZVK1	233 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	DEFB132	Q7Z7B7	95 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	HS6ST3	Q8IZP7	471 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TBC1D19	Q8N5T2	526 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	C7orf25	Q9BPX7	421 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ATP6V1H	Q9UI12	483 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	CARMIL3	Q8ND23	1372 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ATP10D	Q9P241	1426 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	EXOC1L	A0A1B0GW35	172 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ULK3	Q6PHR2	472 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ACAD11	Q709F0	780 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SCUBE2	Q9NQ36	999 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644		K7ERI5	159 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SMAP	O00193	183 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	C2CD2L	O14523	706 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	RASSF9	O75901	435 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	PARN	O95453	639 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	OR52Z1	P0C646	297 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	HOXA13	P31271	388 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	GRIK1	P39086	918 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	KPNA1	P52294	538 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	MORC3	Q14149	939 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	FAM173B	Q6P4H8	233 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	APLF	Q8IW19	511 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	EPB41L5	Q9HCM4	733 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	DCTN4	Q9UJW0	460 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	DARS	P14868	501 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	RPS6KB1	P23443	525 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	GTF2A2	P52657	109 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	NLRP12	P59046	1061 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SCRN3	Q0VDG4	424 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	MORF4L2	Q15014	288 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TAF1B	Q53T94	588 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	RNF146	Q9NTX7	359 aa		11.77	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TBX3	O15119	743 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	DYNLL1	P63167	89 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TOMM20	Q15388	145 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	FAM162A	Q96A26	154 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ERLEC1	Q96DZ1	483 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	HES6	Q96HZ4	224 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SPON2	Q9BUD6	331 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	KIAA1024	Q9UPX6	916 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	IGSF1	Q8N6C5	1336 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SYNCRIP	O60506	623 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	NFIC	P08651	508 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	CEBPG	P53567	150 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	MYLK2	Q9H1R3	596 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SERTAD1	Q9UHV2	236 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644		A6NNZ2	444 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	CTNND1	O60716	968 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TUBB8	Q3ZCM7	444 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	OLFML2A	Q68BL7	652 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	OOSP2	Q86WS3	158 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	GJA10	Q969M2	543 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ELAC2	Q9BQ52	826 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	C17orf80	Q9BSJ5	609 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	IL1RL2	Q9HB29	575 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	NOVA2	Q9UNW9	492 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	XPO1	O14980	1071 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	DEAF1	O75398	565 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	FKBP9	O95302	570 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TCN1	P20061	433 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SERPINB3	P29508	390 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	HMGCS2	P54868	508 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ACTN3	Q08043	901 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	FKBP9P1	Q75LS8	142 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	PODN	Q7Z5L7	613 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	CLEC4F	Q8N1N0	589 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	SLC13A1	Q9BZW2	595 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	UNC45A	Q9H3U1	944 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	ZNF302	Q9NR11	478 aa		11.76	□□□□□ -0.53
CACNA1C-218	ENST00000399644	TMEM39A	Q9NV64	488 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms