RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 GPR182O15218 404 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 LINC00116Q8NCU8 138 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 CEP19Q96LK0 163 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 VPS11Q9H270 941 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 DPP7Q9UHL4 492 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 SPATA31A1Q5TZJ5 1347 aa12.8□□□□□ -0.36
CACNA1C-213ENST00000399629 APOL1O14791 398 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 LIG3P49916 1009 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 LAMC2Q13753 1193 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 E2F5Q15329 346 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 TMEM39AQ9NV64 488 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 AIPL1Q9NZN9 384 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 E2F6O75461 281 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 DNAJC8O75937 253 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 EEF1B2P24534 225 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 AMPD2Q01433 879 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 C2orf54Q08AI8 447 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 IGFLR1Q9H665 355 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SNAP23O00161 211 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 URODP06132 367 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SEPT8Q92599 483 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 POLR3CQ9BUI4 534 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 MXD3Q9BW11 206 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SAYSD1Q9NPB0 183 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SETD1BQ9UPS6 1966 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SYNCRIPO60506 623 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 ENTPD3O75355 529 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 VEGFAP15692 232 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 C10orf120Q5SQS8 335 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 TAGAPQ8N103 731 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 MTBPQ96DY7 904 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 HEMGNQ9BXL5 484 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 UBXN8O00124 270 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 PDGFRBP09619 1106 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 MYBL1P10243 752 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 ACAD11Q709F0 780 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 SYTL2Q9HCH5 934 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 CHCHD3Q9NX63 227 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 RAB23Q9ULC3 237 aa12.79□□□□□ -0.36
CACNA1C-213ENST00000399629 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 KRT7P08729 469 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 GPC5P78333 572 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 EPHA7Q15375 998 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ATPAF2Q8N5M1 289 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 MED15Q96RN5 788 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ASPSCR1Q9BZE9 553 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 H0Y626 953 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 GOLGA8MH3BSY2 632 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 NPTXRO95502 500 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 RAG1P15918 1043 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 CXCR5P32302 372 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 APBA1Q02410 837 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 DNAJC17Q9NVM6 304 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ZNF263O14978 683 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 BLVRAP53004 296 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 CRLF3Q8IUI8 442 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 C17orf53Q8N3J3 647 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SLITRK1Q96PX8 696 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ASAP2O43150 1006 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ODC1P11926 461 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 NOTUMQ6P988 496 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 CALR3Q96L12 384 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 PACSIN2Q9UNF0 486 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 KRT37O76014 449 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 TIPINQ9BVW5 301 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 AP1M1Q9BXS5 423 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms