RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 C8orf74Q6P047 294 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 PEX26Q7Z412 305 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SLC17A8Q8NDX2 589 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 TAS1R2Q8TE23 839 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 PARD3BQ8TEW8 1205 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 IFT74Q96LB3 600 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 THAP2Q9H0W7 228 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL25A1-202ENST00000399127 STAM2O75886 525 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 ANXA13P27216 316 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 KIF22Q14807 665 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
COL25A1-202ENST00000399127 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 CTNNBL1Q8WYA6 563 aaPredicted RBP12.7□□□□□ -0.38
COL25A1-202ENST00000399127 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 KRT12Q99456 494 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 AGPAT1Q99943 283 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
COL25A1-202ENST00000399127 CYP26A1O43174 497 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 CEP104O60308 925 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 SGPL1O95470 568 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 MCM3P25205 808 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 ITIH3Q06033 890 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
COL25A1-202ENST00000399127 KRT39Q6A163 491 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 RIOX2Q8IUF8 465 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 TMEM174Q8WUU8 243 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 PI4K2AQ9BTU6 479 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 STIM2Q9P246 746 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 SCN4AP35499 1836 aa12.7□□□□□ -0.38
COL25A1-202ENST00000399127 LRRIQ4A6NIV6 560 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 BUB1BO60566 1050 aaPredicted RBP12.69□□□□□ -0.38
COL25A1-202ENST00000399127 CALCAP01258 141 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 OATP04181 439 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 GJA5P36382 358 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 SNRPFP62306 86 aaKnown RBP12.69□□□□□ -0.38
COL25A1-202ENST00000399127 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 SLC47A2Q86VL8 602 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 RPUSD2Q8IZ73 545 aaKnown RBP12.69□□□□□ -0.38
COL25A1-202ENST00000399127 ASAP3Q8TDY4 903 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 DHX38Q92620 1227 aaKnown RBP12.69□□□□□ -0.38
COL25A1-202ENST00000399127 SELENOOQ9BVL4 669 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 AGTPBP1Q9UPW5 1226 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 MAPK13O15264 365 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 P4HA2O15460 535 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 GLI1P08151 1106 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 RFX1P22670 979 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 ACOT2P49753 483 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 LIG4P49917 911 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 CYP24A1Q07973 514 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 MAP9Q49MG5 647 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 AP1M1Q9BXS5 423 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 COG5Q9UP83 839 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 KCNH4Q9UQ05 1017 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 SH3BP1Q9Y3L3 701 aa12.69□□□□□ -0.38
COL25A1-202ENST00000399127 MAFBQ9Y5Q3 323 aaPredicted RBP12.69□□□□□ -0.38
COL25A1-202ENST00000399127 FARP2O94887 1054 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 MARK3P27448 753 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 FASTKD5Q7L8L6 764 aaKnown RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 NOP9Q86U38 636 aaKnown RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 METTL13Q8N6R0 699 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 USP38Q8NB14 1042 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 RFFLQ8WZ73 363 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 HVCN1Q96D96 273 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 PCYT2Q99447 389 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 ANKFY1Q9P2R3 1169 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GSTTP1A0A1W2PQM5 241 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 CELF2O95319 508 aaKnown RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GGPS1O95749 300 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-202ENST00000399127 TMEM253P0C7T8 217 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 OSBPP22059 807 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GLRA2P23416 452 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 ICAM3P32942 547 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 WNT7BP56706 349 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 GPS2Q13227 327 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 DRP2Q13474 957 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 TRADDQ15628 312 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms