RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RPS6KL1Q9Y6S9 549 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 ZNF646O15015 1829 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 WFS1O76024 890 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 KLRC3Q07444 240 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 KIAA1755Q5JYT7 1200 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 FBXO11Q86XK2 927 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 LMNTD2Q8IXW0 634 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 RDH13Q8NBN7 331 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 B4GALNT2Q8NHY0 566 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 KLHL29Q96CT2 875 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 SYT11Q9BT88 431 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 ADAM22Q9P0K1 906 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 GAP43P17677 238 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 MSH2P43246 934 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 MARCKSL1P49006 195 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 GALNTL6Q49A17 601 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 ZDHHC24Q6UX98 284 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 NAP1L3Q99457 506 aaPredicted RBP17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 PABPC3Q9H361 631 aaKnown RBP17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 CCDC134Q9H6E4 229 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 DBNDD1Q9H9R9 158 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 CHCHD3Q9NX63 227 aaKnown RBP17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 ASB3Q9Y575 518 aa17.14■□□□□ 0.34
CHMP1A-201ENST00000397901 G3V3G9 751 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 KIAA0391O15091 583 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 KRT16P08779 473 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 CRKP46108 304 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 IFI35P80217 286 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 MAPK7Q13164 816 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 SLC29A2Q14542 456 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 SPDYCQ5MJ68 293 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 ARHGAP22Q7Z5H3 698 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 KRT35Q92764 455 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 DYDC2Q96IM9 177 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 EPAS1Q99814 870 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 POLR3CQ9BUI4 534 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 ARHGEF3Q9NR81 526 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 LRRC42Q9Y546 428 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 PCDHAC2Q9Y5I4 1007 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 SCN9AQ15858 1988 aa17.14■□□□□ 0.33
CHMP1A-201ENST00000397901 SIPA1L1O43166 1804 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 RNF8O76064 485 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 VCAM1P19320 739 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 SLCO1A2P46721 670 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 COPS2P61201 443 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 MYL7Q01449 175 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 SGSM1Q2NKQ1 1148 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 ANO7Q6IWH7 933 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 GORASP1Q9BQQ3 440 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 DIS3Q9Y2L1 958 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 ALG6Q9Y672 507 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 A8MUI8 341 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 FOXN3O00409 490 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 EIF3DO15371 548 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 PYGLP06737 847 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 MMP13P45452 471 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 CMPK2Q5EBM0 449 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 HS2ST1Q7LGA3 356 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 SPATA21Q7Z572 469 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
CHMP1A-201ENST00000397901 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 F5H6K3 240 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 GDF11O95390 407 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 NUDT17P0C025 328 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 BNIP1Q12981 228 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 DHX34Q14147 1143 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 PHLDB3Q6NSJ2 640 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 C1orf186Q6ZWK4 172 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 MRIQ9BWK5 157 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 AGPAT3Q9NRZ7 376 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 WDR35Q9P2L0 1181 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 RASAL2Q9UJF2 1139 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 RPTORQ8N122 1335 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 HIP1RO75146 1068 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 FGFR4P22455 802 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 RPL21P46778 160 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms