RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 EIF3HO15372 352 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CD302Q8IX05 232 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 BCAS4Q8TDM0 211 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PARD3BQ8TEW8 1205 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ANKEF1Q9NU02 776 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NOCTQ9UK39 431 aaKnown RBP19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PCDHA10Q9Y5I2 948 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MMEP08473 750 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GPC5P78333 572 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MESDQ14696 234 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 VSIG10LQ86VR7 867 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MAP4K3Q8IVH8 894 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 FAM71AQ8IYT1 594 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 EIF1ADQ8N9N8 165 aaKnown RBP19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GLG1Q92896 1179 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TIPINQ9BVW5 301 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 UTP11Q9Y3A2 253 aaKnown RBP19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PFASO15067 1338 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SKOR1P84550 965 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SLC39A4Q6P5W5 647 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CPNE8Q86YQ8 564 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TAS1R2Q8TE23 839 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 UBLCP1Q8WVY7 318 aaPredicted RBP19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ADGRA3Q8IWK6 1321 aa19.75■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MAPK13O15264 365 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RTN2O75298 545 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CTNNA1P35221 906 aaKnown RBP19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CCT5P48643 541 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KRT39Q6A163 491 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 BTBD6Q96KE9 485 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ATP6V1G3Q96LB4 118 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 EXOC7Q9UPT5 735 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZEB2O60315 1214 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CLSTN1O94985 981 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DLATP10515 647 aaKnown RBP19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 BACE1P56817 501 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PTENP60484 403 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 FBXW10Q5XX13 1052 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SWSAP1Q6NVH7 229 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 POTEAQ6S8J7 498 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 POMGNT1Q8WZA1 660 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DHX38Q92620 1227 aaKnown RBP19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 LRRC45Q96CN5 670 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GJA3Q9Y6H8 435 aa19.74■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RGS20O76081 388 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CALCAP01258 141 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SCP2P22307 547 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CCND2P30279 289 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HMGCS2P54868 508 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GUCY1A3Q02108 690 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 USP20Q9Y2K6 914 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DIS3Q9Y2L1 958 aaKnown RBP19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 H0YGN5 161 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NFKBIEO00221 500 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NR1D1P20393 614 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 COMTP21964 271 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GMPSP49915 693 aaPredicted RBP19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SNRPFP62306 86 aaKnown RBP19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DR1Q01658 176 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 FMO1Q01740 532 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HELQQ8TDG4 1101 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SHC3Q92529 594 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NFS1Q9Y697 457 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DOCK5Q9H7D0 1870 aa19.73■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MFAP3P55082 362 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DALRD3Q5D0E6 543 aaKnown RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SAMD3Q8N6K7 520 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SEC14L1Q92503 715 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PI4K2AQ9BTU6 479 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RGS17Q9UGC6 210 aaPredicted RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KIAA1217Q5T5P2 1943 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HPDP32754 393 aaPredicted RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HADHBP55084 474 aaKnown RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KCNV1Q6PIU1 500 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KDM7AQ6ZMT4 941 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RNF217Q8TC41 542 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ATP8B4Q8TF62 1192 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TATDN2Q93075 761 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 VTI1AQ96AJ9 217 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 WRNIP1Q96S55 665 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TMBIM4Q9HC24 238 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HNRNPDLO14979 420 aaKnown RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CYP11B1P15538 503 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KCNA2P16389 499 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DHX9Q08211 1270 aaKnown RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZNF844Q08AG5 666 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 C11orf63Q6NUN7 778 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 OTUD6AQ7L8S5 288 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TMC3Q7Z5M5 1100 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TMEM8AQ9HCN3 771 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RAB20Q9NX57 234 aa19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SEPT9Q9UHD8 586 aaPredicted RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CNOT7Q9UIV1 285 aaKnown RBP19.72■□□□□ 0.75
CHRFAM7A-202ENST00000397827 COL11A1P12107 1806 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms