RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CNTNAP1P78357 1384 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 CCDC188H7C350 402 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 MYO1FO00160 1098 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 PSAPP07602 524 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 AARSP49588 968 aaKnown RBP eCLIP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 MMP14P50281 582 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 JAK3P52333 1124 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANKRD42Q8N9B4 389 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 AGBL3Q8NEM8 1001 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 CLEC4DQ8WXI8 215 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 SUCLA2Q9P2R7 463 aaPredicted RBP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 TBK1Q9UHD2 729 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 VWA5AO00534 786 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 THAP12O43422 761 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 IFNB1P01574 187 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 VIMP08670 466 aaKnown RBP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 CTNNA2P26232 953 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 PRKCIP41743 596 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 SGO2Q562F6 1265 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANO5Q75V66 913 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 SV2AQ7L0J3 742 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 SLC7A3Q8WY07 619 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 LPAR1Q92633 364 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ATP6V1G3Q96LB4 118 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 ISCUQ9H1K1 167 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 SLC38A10Q9HBR0 1119 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 TMEM51Q9NW97 253 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 PSD3Q9NYI0 1048 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 GGA3Q9NZ52 723 aa11.21□□□□□ -0.61
CPSF1P1-201ENST00000397477 PI4K2BG5E9Z4 385 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 THNSL1Q8IYQ7 743 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 NEK9Q8TD19 979 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 BSNDQ8WZ55 320 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRIM7Q9C029 511 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 SYNCQ9H7C4 482 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 GDF3Q9NR23 364 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 SLC9A2Q9UBY0 812 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRPC6Q9Y210 931 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF536O15090 1300 aa11.21□□□□□ -0.62
CPSF1P1-201ENST00000397477 ADCY8P40145 1251 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 PTGER2P43116 358 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 CUL1Q13616 776 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 ARFGAP2Q8N6H7 521 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 LRRC57Q8N9N7 239 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 FBXO25Q8TCJ0 367 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 PCDHB18PQ96TA0 734 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 RGS16O15492 202 aaPredicted RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 JAM2P57087 298 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 ACTR2P61160 394 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 DCUN1D2Q6PH85 259 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 JAMLQ86YT9 394 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 ATRNL1Q5VV63 1379 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 GOLGA8SH3BPF8 625 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 PYGMP11217 842 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 ATP6V0A4Q9HBG4 840 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 FAM114A2Q9NRY5 505 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
CPSF1P1-201ENST00000397477 GTPBP10A4D1E9 387 aaKnown RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.626e-6■■■■□ 25.8
CPSF1P1-201ENST00000397477 SLC26A4O43511 780 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 RTN2O75298 545 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 CYP11B1P15538 503 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 SCP2P22307 547 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 BACE1P56817 501 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 DYNLT1P63172 113 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 FMNL3Q8IVF7 1028 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 LRRC71Q8N4P6 559 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms