RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PDZD7Q9H5P4 517 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 CHST12Q9NRB3 414 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 NOC2LQ9Y3T9 749 aaKnown RBP25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 OGTO15294 1046 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 ATP1A3P13637 1013 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 KRT13P13646 458 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 FANCCQ00597 558 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 POU5F1Q01860 360 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 TLE2Q04725 743 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 PAK2Q13177 524 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 SLC27A1Q6PCB7 646 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 EEF2KMTQ96G04 330 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 PIN4Q9Y237 131 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 ATP11BQ9Y2G3 1177 aa25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 KIAA0100Q14667 2235 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-202ENST00000397396 LRRC10BA6NIK2 292 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 ZNF233A6NK53 670 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 ABLIM1O14639 778 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 SNRNP35Q16560 246 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 HSP90AA4PQ58FG1 418 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 CREBRFQ8IUR6 639 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 CDT1Q9H211 546 aa25.68■■□□□ 1.7
TSPAN4-202ENST00000397396 TTLL13PA6NNM8 815 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 CLTBP09497 229 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 FGFR4P22455 802 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 FAAP100Q0VG06 881 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 KRT31Q15323 416 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 MAN2A1Q16706 1144 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 SAAL1Q96ER3 474 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 CPB2Q96IY4 423 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 ZBTB45Q96K62 511 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 TUBGCP2Q9BSJ2 902 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 NOC4LQ9BVI4 516 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 TRIM5Q9C035 493 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 HIPK3Q9H422 1215 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 ST3GAL5Q9UNP4 418 aa25.67■■□□□ 1.7
TSPAN4-202ENST00000397396 GHRP10912 638 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 HOXA11P31270 313 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 CASP4P49662 377 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 UBASH3AP57075 661 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 LPIN1Q14693 890 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 TRAF7Q6Q0C0 670 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 ZBTB33Q86T24 672 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 TRIM59Q8IWR1 403 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 FAM213AQ9BRX8 229 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 ERVK-5Q9HDB9 667 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 USP20Q9Y2K6 914 aa25.66■■□□□ 1.7
TSPAN4-202ENST00000397396 HARSP12081 509 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 ZSCAN20P17040 1043 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 COPB1P53618 953 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 BFSP1Q12934 665 aa25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 NFX1Q12986 1120 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 LRRC26Q2I0M4 334 aa25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 EEF1DP3Q658K8 133 aa25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 UBE2Q1Q7Z7E8 422 aa25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 TRIM6Q9C030 488 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.65■■□□□ 1.7
TSPAN4-202ENST00000397396 STX10O60499 249 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 EN2P19622 333 aaPredicted RBP25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 SURF1Q15526 300 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 TMC2Q8TDI7 906 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 BORCS6Q96GS4 357 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 TMEM39AQ9NV64 488 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 TBX21Q9UL17 535 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 PADI3Q9ULW8 664 aa25.64■■□□□ 1.7
TSPAN4-202ENST00000397396 GOLGA8IPA6NC78 632 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 GOLGA8JA6NMD2 632 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CLTAP09496 248 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CD52P31358 61 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 RAB27AP51159 221 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 TWF2Q6IBS0 349 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CBWD2Q8IUF1 395 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 HACE1Q8IYU2 909 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 RDH13Q8NBN7 331 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 MFSD14AQ96MC6 490 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CCDC94Q9BW85 323 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 FTHL17Q9BXU8 183 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 HAPLN2Q9GZV7 340 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 TAB2Q9NYJ8 693 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 RBAKQ9NYW8 714 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 IFNKQ9P0W0 207 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 A0A1B0GTH6 734 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 FAM189A1O60320 539 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 RFC2P35250 354 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 GRM5P41594 1212 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 VAMP7P51809 220 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 MCCD1P59942 119 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CYP24A1Q07973 514 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 FKBP15Q5T1M5 1219 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 TCERG1LQ5VWI1 586 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 BRSK2Q8IWQ3 736 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 APBB2Q92870 758 aa25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 IFIH1Q9BYX4 1025 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 AGO3Q9H9G7 860 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 CPSF3Q9UKF6 684 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-202ENST00000397396 TANC1Q9C0D5 1861 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 LGALS16A8MUM7 142 aa25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 PES1O00541 588 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 N4BP1O75113 896 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-202ENST00000397396 NPTXRO95502 500 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms