RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RIN3Q8TB24 985 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 RSPH1Q8WYR4 309 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 PPP3CCP48454 512 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 MRPS35P82673 323 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CCDC60Q8IWA6 550 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 TBC1D19Q8N5T2 526 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 IQCA1LA6NCM1 817 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 BRAFP15056 766 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 SPATA21Q7Z572 469 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 PSMA4P25789 261 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 TYK2P29597 1187 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CEP170P1Q96L14 293 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 PPP1R16BQ96T49 567 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ALG13Q9NP73 1137 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ZFATQ9P243 1243 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CCNL1Q9UK58 526 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ITGAXP20702 1163 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 HMOX2P30519 316 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ADD1P35611 737 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF699Q32M78 642 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 AGGF1Q8N302 714 aaeCLIP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CENPTQ96BT3 561 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CLEC4MQ9H2X3 399 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 CHMP2BQ9UQN3 213 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 MYH1P12882 1939 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 MYH2Q9UKX2 1941 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 NDST4Q9H3R1 872 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ABHD10Q9NUJ1 306 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 UVRAGQ9P2Y5 699 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ZC3H7BQ9UGR2 993 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 COX10Q12887 443 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 NCF4Q15080 339 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 BBS7Q8IWZ6 715 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 SPICE1Q8N0Z3 855 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ZSWIM6Q9HCJ5 1215 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 V9GYQ6 96 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 PIPSLA2A3N6 862 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 FKBP9O95302 570 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 TTLL1O95922 423 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 FKBP9P1Q75LS8 142 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 SAMSN1Q9NSI8 373 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 DLGAP2Q9P1A6 1054 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 TLR2O60603 784 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 S100A9P06702 114 aaKnown RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 FLT3P36888 993 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF790Q6PG37 636 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 IFNL3Q8IZI9 196 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 AP5M1Q9H0R1 490 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 TRABDQ9H4I3 376 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
COL4A4-201ENST00000396625 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
COL4A4-201ENST00000396625 A0A087WWV3 80 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 SNPHO15079 494 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PCP11498 1178 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 TRIP10Q15642 601 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PDP2Q9P2J9 529 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 SHANK2Q9UPX8 1470 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PPIP5K2O43314 1243 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 EIF2B2P49770 351 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 WLSQ5T9L3 541 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PCYOX1LQ8NBM8 494 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 LRRC39Q96DD0 335 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ASIC4Q96FT7 647 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 AMNQ9BXJ7 453 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 TRIM24O15164 1050 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ASNA1O43681 348 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 UBXN2AP68543 259 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 KRT84Q9NSB2 600 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 SERPIND1P05546 499 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 CYP19A1P11511 503 aaPredicted RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 KPNB1Q14974 876 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 KCTD1Q719H9 257 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 FAM210AQ96ND0 272 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 CAND2O75155 1236 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 GYS1P13807 737 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 QKIQ96PU8 341 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ALBP02768 609 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PRPF39Q86UA1 669 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 SUCLG2Q96I99 432 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 CEP72Q9P209 647 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PSAPP07602 524 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 TCN1P20061 433 aaPredicted RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ATXN3P54252 364 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms