RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PPP1R7Q15435 360 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 UBAP2Q5T6F2 1119 aaKnown RBP14.33□□□□□ -0.12
TRIM40-207ENST00000396581 PHLDB3Q6NSJ2 640 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 ZNF720Q7Z2F6 126 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 ADAT2Q7Z6V5 191 aaKnown RBP14.33□□□□□ -0.12
TRIM40-207ENST00000396581 C12orf50Q8NA57 414 aaPredicted RBP14.33□□□□□ -0.12
TRIM40-207ENST00000396581 CCHCR1Q8TD31 782 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 TMEM174Q8WUU8 243 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 SYNPO2Q9UMS6 1093 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 ATP2C2O75185 946 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 FAM13AO94988 1023 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 GDF11O95390 407 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 GH2P01242 217 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 MUTP22033 750 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 PSEN1P49768 467 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 CYP4A11Q02928 519 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 TAOK1Q7L7X3 1001 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 GMCL1P1Q8NEA9 526 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 EPS8L3Q8TE67 593 aaKnown RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 KRT35Q92764 455 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 SLCO2A1Q92959 643 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 HOOK2Q96ED9 719 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 ELAC2Q9BQ52 826 aaKnown RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 STRA6Q9BX79 667 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 TMEM39BQ9GZU3 492 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 WNT8AQ9H1J5 351 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 IKZF4Q9H2S9 585 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 AGPAT3Q9NRZ7 376 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 TLDC2A0PJX2 215 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 KRT13P13646 458 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 SIX1Q15475 284 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 AADACL2Q6P093 401 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 CCDC137Q6PK04 289 aaKnown RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 EXOC3L1Q86VI1 746 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 PARVGQ9HBI0 331 aa14.32□□□□□ -0.12
TRIM40-207ENST00000396581 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-207ENST00000396581 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 FOXN3O00409 490 aaPredicted RBP14.31□□□□□ -0.12
TRIM40-207ENST00000396581 EGFRP00533 1210 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 COILP38432 576 aaPredicted RBP14.31□□□□□ -0.12
TRIM40-207ENST00000396581 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
TRIM40-207ENST00000396581 SLC8A3P57103 927 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 GPC5P78333 572 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 MYL7Q01449 175 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 BFSP1Q12934 665 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 COG2Q14746 738 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 ZC2HC1CQ53FD0 456 aaPredicted RBP14.31□□□□□ -0.12
TRIM40-207ENST00000396581 SLFN13Q68D06 897 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 TRMT10CQ7L0Y3 403 aaKnown RBP14.31□□□□□ -0.12
TRIM40-207ENST00000396581 TEX2Q8IWB9 1127 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 MYCT1Q8N699 235 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 MAB21L3Q8N8X9 362 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 RGL1Q9NZL6 768 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 KCND2Q9NZV8 630 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 AGAP1Q9UPQ3 857 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 USP20Q9Y2K6 914 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
TRIM40-207ENST00000396581 SFI1A8K8P3 1242 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 F5H6K3 240 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 TP73O15350 636 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 P4HA2O15460 535 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SLITRK3O94933 977 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 RARAP10276 462 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 BCRP11274 1271 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 MARCKSL1P49006 195 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 E2F5Q15329 346 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 HS2ST1Q7LGA3 356 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 PIK3CDO00329 1044 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-207ENST00000396581 TRIM49P0CI25 452 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 TRIM49CP0CI26 452 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 FGFR4P22455 802 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 NCALDP61601 193 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 PPP2R5CQ13362 524 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SEL1L2Q5TEA6 688 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 OTOP1Q7RTM1 612 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SLC13A5Q86YT5 568 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-207ENST00000396581 GBP7Q8N8V2 638 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 GMCL1Q96IK5 515 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-207ENST00000396581 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 LRRC19Q9H756 370 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 CTTNBP2NLQ9P2B4 639 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 BAIAP2L1Q9UHR4 511 aa14.3□□□□□ -0.12
TRIM40-207ENST00000396581 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-207ENST00000396581 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
TRIM40-207ENST00000396581 O00370 1275 aa14.29□□□□□ -0.12
TRIM40-207ENST00000396581 RTN2O75298 545 aa14.29□□□□□ -0.12
TRIM40-207ENST00000396581 PSMD10O75832 226 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms