RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ARIH2O95376 493 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 DLATP10515 647 aaKnown RBP16.15■□□□□ 0.18
CBX3-202ENST00000396386 USP8P40818 1118 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 PSMD6Q15008 389 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 GTF3C2Q8WUA4 911 aaPredicted RBP16.15■□□□□ 0.18
CBX3-202ENST00000396386 SHC3Q92529 594 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 KAT5Q92993 513 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 KREMEN1Q96MU8 473 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 POP1Q99575 1024 aaKnown RBP16.15■□□□□ 0.18
CBX3-202ENST00000396386 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 L1RE1Q9UN81 338 aa16.15■□□□□ 0.18
CBX3-202ENST00000396386 LOC102724159A0A0B4J2E5 919 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 K7ERI5 159 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 MAP2K7O14733 419 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 GJA5P36382 358 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 ERVK-9P63128 1117 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 PWP2Q15269 919 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 Q3C1V9 767 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 LDLRAD1Q5T700 205 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 WDR78Q5VTH9 848 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 SLFN12LQ6IEE8 588 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 SV2AQ7L0J3 742 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 PEX26Q7Z412 305 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 TAS1R2Q8TE23 839 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 MS4A14Q96JA4 679 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 PBKQ96KB5 322 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 AGO2Q9UKV8 859 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 ZSWIM8A7E2V4 1837 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 KCNK3O14649 394 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.174e-6■■■■□ 25.4
CBX3-202ENST00000396386 MAFO75444 373 aaPredicted RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 LGR5O75473 907 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 ABCB4P21439 1286 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBX3-202ENST00000396386 CAPSQ13938 189 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 CELF3Q5SZQ8 465 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 C8orf74Q6P047 294 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 DAAM2Q86T65 1068 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 PALB2Q86YC2 1186 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 HELQQ8TDG4 1101 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 EPS8L1Q8TE68 723 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 PSPC1Q8WXF1 523 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 BBXQ8WY36 941 aaPredicted RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 FAM81BQ96LP2 452 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 GPR20Q99678 358 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 GOLPH3Q9H4A6 298 aa16.14■□□□□ 0.17
CBX3-202ENST00000396386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.177e-6■■■■■ 53.1
CBX3-202ENST00000396386 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
CBX3-202ENST00000396386 GAS2O43903 313 aaKnown RBP16.13■□□□□ 0.17
CBX3-202ENST00000396386 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
CBX3-202ENST00000396386 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
CBX3-202ENST00000396386 ENOSF1Q7L5Y1 443 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
CBX3-202ENST00000396386 GLG1Q92896 1179 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 FNBP1Q96RU3 617 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 C1orf112Q9NSG2 853 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 TAS2R14Q9NYV8 317 aa16.13■□□□□ 0.17
CBX3-202ENST00000396386 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
CBX3-202ENST00000396386 ADCY3O60266 1144 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 SGPL1O95470 568 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 NLRP11P59045 1033 aaKnown RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 CLDN10P78369 228 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 GLE1Q53GS7 698 aaKnown RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 C15orf39Q6ZRI6 1047 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 NOP9Q86U38 636 aaKnown RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 RHOT2Q8IXI1 618 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 TCP11Q8WWU5 503 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 LRRC1Q9BTT6 524 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 UBXN6Q9BZV1 441 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 THAP2Q9H0W7 228 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 MARK3P27448 753 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 PDE6CP51160 858 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 C1QTNF8P60827 252 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 GPS2Q13227 327 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 CASP8Q14790 479 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 IER5Q5VY09 327 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 DHX37Q8IY37 1157 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms