RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TAF1DQ9H5J8 278 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 POLR2AP24928 1970 aaKnown RBP18.11■□□□□ 0.49
NUP50-202ENST00000396096 ESYT3A0FGR9 886 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 GOLGA8KD6RF30 607 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 SART1O43290 800 aaKnown RBP18.11■□□□□ 0.49
NUP50-202ENST00000396096 HSF2BPO75031 334 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 ZC3H11AO75152 810 aaKnown RBP eCLIP18.11■□□□□ 0.49
NUP50-202ENST00000396096 PTPROQ16827 1216 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 PPM1KQ8N3J5 372 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 GOLGA6L1Q8N7Z2 621 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 CCDC127Q96BQ5 260 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 NT5C1BQ96P26 610 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 PCDHB18PQ96TA0 734 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 KIAA1586Q9HCI6 787 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 RAB20Q9NX57 234 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 SNCAIPQ9Y6H5 919 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 STYXL1Q9Y6J8 313 aa18.11■□□□□ 0.49
NUP50-202ENST00000396096 MIF4GDA9UHW6 222 aaKnown RBP18.1■□□□□ 0.49
NUP50-202ENST00000396096 HNRNPDLO14979 420 aaKnown RBP18.1■□□□□ 0.49
NUP50-202ENST00000396096 KIAA0391O15091 583 aaKnown RBP18.1■□□□□ 0.49
NUP50-202ENST00000396096 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 FAM153BP0C7A2 387 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 CLDN10P78369 228 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 SP2Q02086 613 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
NUP50-202ENST00000396096 FAM153CQ494X1 144 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 DCAF12L1Q5VU92 463 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 LBX2Q6XYB7 198 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 C15orf39Q6ZRI6 1047 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 IQCKQ8N0W5 287 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 IFT81Q8WYA0 676 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 ZBTB9Q96C00 473 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 FAM81BQ96LP2 452 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 FAM153AQ9UHL3 310 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 ZNFX1Q9P2E3 1918 aaKnown RBP18.1■□□□□ 0.49
NUP50-202ENST00000396096 SYNGAP1Q96PV0 1343 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 OTOFQ9HC10 1997 aa18.1■□□□□ 0.49
NUP50-202ENST00000396096 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ATP4AP20648 1035 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 EMC2Q15006 297 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 PPP2R5EQ16537 467 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 SV2AQ7L0J3 742 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ENOSF1Q7L5Y1 443 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 TAS1R2Q8TE23 839 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 MORC4Q8TE76 937 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 SEC14L1Q92503 715 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 RPS6KC1Q96S38 1066 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 NAP1L3Q99457 506 aaPredicted RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 POP1Q99575 1024 aaKnown RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 CYP26A1O43174 497 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 EXTL3O43909 919 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 PIGRP01833 764 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ECHS1P30084 290 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ACTN2P35609 894 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 HSPA9P38646 679 aaKnown RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 USP8P40818 1118 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 FMO1Q01740 532 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 POU5F1Q01860 360 aaKnown RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 GCNT1Q02742 428 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 PPFIA1Q13136 1202 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 CD302Q8IX05 232 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 CCDC26Q8TAB7 109 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 NIFKQ9BYG3 293 aaKnown RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 ZNF302Q9NR11 478 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 TOPORSQ9NS56 1045 aaPredicted RBP18.09■□□□□ 0.49
NUP50-202ENST00000396096 CTTNBP2NLQ9P2B4 639 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ALG6Q9Y672 507 aa18.09■□□□□ 0.49
NUP50-202ENST00000396096 ZNF233A6NK53 670 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 OATP04181 439 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 ITGA4P13612 1032 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 CYP11B1P15538 503 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 CDR2Q01850 454 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 SP4Q02446 784 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 MTERF2Q49AM1 385 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 TAF3Q5VWG9 929 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 MAATS1Q7Z4T9 603 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 SLC47A2Q86VL8 602 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 CEP89Q96ST8 783 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 DDX47Q9H0S4 455 aaKnown RBP18.08■□□□□ 0.49
NUP50-202ENST00000396096 PORCNQ9H237 461 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.49
NUP50-202ENST00000396096 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.48
NUP50-202ENST00000396096 FGGP02679 453 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 CYP1A2P05177 515 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 CAPN2P17655 700 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 EDNRBP24530 442 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 NAMPTP43490 491 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 POLGP54098 1239 aaPredicted RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 VGLL4Q14135 290 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 PSMD6Q15008 389 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 TRADDQ15628 312 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 CYFIP1Q7L576 1253 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms