RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 SGCZQ96LD1 299 aa10.07□□□□□ -0.8
PFDN6-205ENST00000395134 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
PFDN6-205ENST00000395134 PIH1D3Q9NQM4 214 aaKnown RBP10.07□□□□□ -0.8
PFDN6-205ENST00000395134 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
PFDN6-205ENST00000395134 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
PFDN6-205ENST00000395134 DIS3Q9Y2L1 958 aaKnown RBP10.07□□□□□ -0.8
PFDN6-205ENST00000395134 PCDHGB3Q9Y5G1 929 aa10.07□□□□□ -0.8
PFDN6-205ENST00000395134 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
PFDN6-205ENST00000395134 CKMP06732 381 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 DYNLL1P63167 89 aaKnown RBP10.06□□□□□ -0.8
PFDN6-205ENST00000395134 UBXN2AP68543 259 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 JAG1P78504 1218 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 DENND5AQ6IQ26 1287 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 TEKT5Q96M29 485 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 CCDC138Q96M89 665 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 FAM193BQ96PV7 902 aaPredicted RBP10.06□□□□□ -0.8
PFDN6-205ENST00000395134 ZFYVE21Q9BQ24 234 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
PFDN6-205ENST00000395134 FAM204AQ9H8W3 233 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 DBNLQ9UJU6 430 aaKnown RBP10.06□□□□□ -0.8
PFDN6-205ENST00000395134 NAGPAQ9UK23 515 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 FLT1P17948 1338 aa10.06□□□□□ -0.8
PFDN6-205ENST00000395134 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 IDH1O75874 414 aaKnown RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 COPB2P35606 906 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 FXR1P51114 621 aaKnown RBP eCLIP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 SCAND1P57086 179 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 ZNF445P59923 1031 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 ZNF267Q14586 743 aaPredicted RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 PDCD2Q16342 344 aaPredicted RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 CCDC158Q5M9N0 1113 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 BROXQ5VW32 411 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 ICE2Q659A1 982 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 MZT2AQ6P582 158 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 TXNDC11Q6PKC3 985 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 U2AF1L4Q8WU68 220 aaKnown RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 TBATAQ96M53 351 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 DEFB118Q96PH6 123 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
PFDN6-205ENST00000395134 DNAJC18Q9H819 358 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 RSAD1Q9HA92 442 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 COQ6Q9Y2Z9 468 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 SMCHD1A6NHR9 2005 aa10.05□□□□□ -0.8
PFDN6-205ENST00000395134 GJB1P08034 283 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 CYP7A1P22680 504 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 CAP2P40123 477 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 GPR85P60893 370 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 IRX3P78415 501 aaPredicted RBP10.04□□□□□ -0.8
PFDN6-205ENST00000395134 CYP4F3Q08477 520 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 TRIM14Q14142 442 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 NKG7Q16617 165 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 HP1BP3Q5SSJ5 553 aaPredicted RBP10.04□□□□□ -0.8
PFDN6-205ENST00000395134 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 RSPO2Q6UXX9 243 aaPredicted RBP10.04□□□□□ -0.8
PFDN6-205ENST00000395134 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 SNRNP27Q8WVK2 155 aaKnown RBP10.04□□□□□ -0.8
PFDN6-205ENST00000395134 CCT6BQ92526 530 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 COA7Q96BR5 231 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 SLC45A1Q9Y2W3 748 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 FHOD1Q9Y613 1164 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 PARP14Q460N5 1801 aa10.04□□□□□ -0.8
PFDN6-205ENST00000395134 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 PQBP1O60828 265 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 H2AFYO75367 372 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 BAG3O95817 575 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ACAP2Q15057 778 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 CLUL1Q15846 466 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 FAM110CQ1W6H9 321 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 TUBB8Q3ZCM7 444 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ATAT1Q5SQI0 421 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ZNF468Q5VIY5 522 aaPredicted RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 CMIPQ8IY22 773 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ZBTB34Q8NCN2 500 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 FAM156AQ8NDB6 213 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 SYTL5Q8TDW5 730 aaPredicted RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 DIS3LQ8TF46 1054 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 EAF2Q96CJ1 260 aaPredicted RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 NOL6Q9H6R4 1146 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 H2AFY2Q9P0M6 372 aaPredicted RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
PFDN6-205ENST00000395134 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 MCM3APO60318 1980 aa10.03□□□□□ -0.8
PFDN6-205ENST00000395134 RLFQ13129 1914 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms