RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 EFNA5P52803 228 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 TUSC3Q13454 348 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 RAB33AQ14088 237 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 PPP2R5AQ15172 486 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 INF2Q27J81 1249 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 USP41Q3LFD5 358 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 DNASE1L2Q92874 299 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 NT5C3AQ9H0P0 336 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 TRPV4Q9HBA0 871 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 CPLX1O14810 134 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 PER2O15055 1255 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 SPATA31C1P0DKV0 1188 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 GLULP15104 373 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 PROZP22891 400 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 ABCD1P33897 745 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 RPS9P46781 194 aaKnown RBP6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 CLUL1Q15846 466 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 IER5LQ5T953 404 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 ZNF280BQ86YH2 543 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 DTWD2Q8NBA8 298 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 TPCN1Q9ULQ1 816 aa6.92□□□□□ -1.3
SMARCAD1-203ENST00000394961 SF3B1O75533 1304 aaKnown RBP eCLIP6.92□□□□□ -1.36e-6■■■■■ 93.6
SMARCAD1-203ENST00000394961 LILRB5O75023 590 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 GLUD1P00367 558 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 EPHA5P54756 1037 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 RARS2Q5T160 578 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 LEMD2Q8NC56 503 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 CLDN23Q96B33 292 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 DYDC2Q96IM9 177 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 NACC1Q96RE7 527 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 MTRRQ9UBK8 725 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ADAM28Q9UKQ2 775 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 TICRRQ7Z2Z1 1910 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ACKR2O00590 384 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ECI2O75521 394 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 CPA1P15085 419 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 KCNE1P15382 129 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 CYP11B2P19099 503 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 MRPL58Q14197 206 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 HSP90AA2PQ14568 343 aaPredicted RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 C1orf228Q6PIY5 440 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 RBM23Q86U06 439 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ZNF687Q8N1G0 1237 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 C4orf32Q8N8J7 132 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 KIAA1958Q8N8K9 716 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 NTPCRQ9BSD7 190 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 NCOA5Q9HCD5 579 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PTPRHQ9HD43 1115 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PRMT8Q9NR22 394 aaPredicted RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ERLIN2O94905 339 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ARF4P18085 180 aaPredicted RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 CALCRLQ16602 461 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 KYAT1Q16773 422 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PLA2G4FQ68DD2 849 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 FUT10Q6P4F1 479 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 ZNF579Q8NAF0 562 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 KIFAP3Q92845 792 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 DDX27Q96GQ7 796 aaKnown RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 FAM126AQ9BYI3 521 aaPredicted RBP6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PDZD7Q9H5P4 517 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 MAN1C1Q9NR34 630 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 TNFSF13BQ9Y275 285 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 PTPRDP23468 1912 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
SMARCAD1-203ENST00000394961 SPTLC1O15269 473 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 CCNT1O60563 726 aaKnown RBP6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 ZC3H11AO75152 810 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 CD300LGQ6UXG3 332 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 BEST2Q8NFU1 509 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 RPGRIP1Q96KN7 1286 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 PCDHA12Q9UN75 941 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 TNRC6BQ9UPQ9 1833 aaKnown RBP6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 TCHHQ07283 1943 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 SYN3O14994 580 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 TEX28O15482 410 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 NEMFO60524 1076 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 GRM5P41594 1212 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 ECM1Q16610 540 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 RNF149Q8NC42 400 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 LNX1Q8TBB1 728 aaPredicted RBP6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 SHDQ96IW2 340 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 SNX27Q96L92 541 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 KCNK12Q9HB15 430 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 MYO9BQ13459 2157 aa6.9□□□□□ -1.3
SMARCAD1-203ENST00000394961 CUL9Q8IWT3 2517 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 ABLIM3O94929 683 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 LAMP2P13473 410 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 CYP3A5P20815 502 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms