RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 HES6Q96HZ4 224 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 THAP9Q9H5L6 903 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 GRAP2O75791 330 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ARSEP51690 589 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 RARS2Q5T160 578 aaKnown RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ZNF614Q8N883 585 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 JADE3Q92613 823 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ZNF556Q9HAH1 456 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 RGS5O15539 181 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 SWSAP1Q6NVH7 229 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 SLC30A5Q8TAD4 765 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 SH3RF3Q8TEJ3 882 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 FAM136AQ96C01 138 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 PKP3Q9Y446 797 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 ZBTB39O15060 712 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 NAA30Q147X3 362 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 MAGED4Q96JG8 741 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 PIF1Q9H611 641 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 CD274Q9NZQ7 290 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 FAM32AQ9Y421 112 aaKnown RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 PNMA6AP0CW24 399 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 CUL1Q13616 776 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 LSG1Q9H089 658 aaKnown RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 A8MXQ7 604 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 PBLDP30039 288 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 CPA2P48052 419 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 CDR2LQ86X02 465 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 EIF4G3O43432 1585 aaKnown RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 RNF103O00237 685 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 CDH6P55285 790 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 NCALDP61601 193 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 SLC17A8Q8NDX2 589 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 GH2P01242 217 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 ATP12AP54707 1039 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 VSTM4Q8IW00 320 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 TRIM54Q9BYV2 358 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 EML4Q9HC35 981 aaKnown RBP12.93□□□□□ -0.34
SIN3A-202ENST00000394947 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
SIN3A-202ENST00000394947 NFKBIAP25963 317 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 GPC5P78333 572 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 PARVBQ9HBI1 364 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 PAPOLBQ9NRJ5 636 aaKnown RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 PKD2L2Q9NZM6 624 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 MYO1CO00159 1063 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 CTSHP09668 335 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 ATP6V1B1P15313 513 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 EIF3BP55884 814 aaKnown RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 HIC1Q14526 733 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 KIF2BQ8N4N8 673 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 PCMTD2Q9NV79 361 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 NCF1BA6NI72 391 aaPredicted RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 NCF1CA8MVU1 366 aaPredicted RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 C21orf2O43822 256 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 NCF1P14598 390 aaPredicted RBP12.92□□□□□ -0.34
SIN3A-202ENST00000394947 RABGAP1LQ5R372 815 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 SARM1Q6SZW1 724 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
SIN3A-202ENST00000394947 TJP2Q9UDY2 1190 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms