RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 YTHDF3Q7Z739 585 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC13A5Q86YT5 568 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 RPS6KC1Q96S38 1066 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 DDX20Q9UHI6 824 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 DBR1Q9UK59 544 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 RASA4BC9J798 803 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 RASA4O43374 803 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 KRT1P04264 644 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 GYS1P13807 737 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 TM4SF1P30408 202 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 TRADDQ15628 312 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 RIT2Q99578 217 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 FAM129AQ9BZQ8 928 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 NOP53Q9NZM5 478 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 SCINQ9Y6U3 715 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ENTPD3O75355 529 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 MUTP22033 750 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 CYB5D1Q6P9G0 228 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 MIGA2Q7L4E1 593 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ENOSF1Q7L5Y1 443 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ASNSP08243 561 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 FNTAP49354 379 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 TRPM8Q7Z2W7 1104 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 CNPY4Q8N129 248 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 CYP2W1Q8TAV3 490 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 JDP2Q8WYK2 163 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 GTF3C4Q9UKN8 822 aa12.47□□□□□ -0.41
UBE2D3-209ENST00000394804 UTRNP46939 3433 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 SGK1O00141 431 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 CPP00450 1065 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 PLS3P13797 630 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 ITIH2P19823 946 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 CA4P22748 312 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 ABCD1P33897 745 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 KCNA1Q09470 495 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 COG2Q14746 738 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 LONRF1Q17RB8 773 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 ARSHQ5FYA8 562 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 CYFIP1Q7L576 1253 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 GGA2Q9UJY4 613 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 ASTN1O14525 1302 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 FAM47EQ6ZV65 393 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC30A5Q8TAD4 765 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 SAYSD1Q9NPB0 183 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-209ENST00000394804 FRMD3A2A2Y4 597 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 SCP2P22307 547 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 SCTRP47872 440 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 PSMC5P62195 406 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 KRT76Q01546 638 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 NR1H3Q13133 447 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 C11orf63Q6NUN7 778 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 BTNL9Q6UXG8 535 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 LRRC34Q8IZ02 419 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 ATL2Q8NHH9 583 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 TIPINQ9BVW5 301 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 PICK1Q9NRD5 415 aa12.46□□□□□ -0.42
UBE2D3-209ENST00000394804 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 EML1O00423 815 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MEIS2O14770 477 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MYBL1P10243 752 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 RARGP13631 454 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 GABPAQ06546 454 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SPARCL1Q14515 664 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SLC20A1Q8WUM9 679 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MPHOSPH6Q99547 160 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SH2D3AQ9BRG2 576 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms