RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 HSD17B3P37058 310 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 GPR141Q7Z602 305 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 NGRNQ9NPE2 291 aaKnown RBP17.08■□□□□ 0.33
SHANK1-204ENST00000391814 PSMD14O00487 310 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 SLC9A5Q14940 896 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 TBCCQ15814 346 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 RFFLQ8WZ73 363 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 MSTO1Q9BUK6 570 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 DEFA1P59665 94 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 DEFA3P59666 94 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 CDR2LQ86X02 465 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 E2F8A0AVK6 867 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 ZSCAN9O15535 394 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 SASH1O94885 1247 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.32
SHANK1-204ENST00000391814 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.32
SHANK1-204ENST00000391814 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PRR23D1E9PI22 279 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 AP1G2O75843 785 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PRR23D2P0DMB1 279 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PEX3P56589 373 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 ABCB5Q2M3G0 1257 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 MTERF2Q49AM1 385 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 LRRC8BQ6P9F7 803 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 STK32BQ9NY57 414 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PYGLP06737 847 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 HOXA13P31271 388 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 SCG3Q8WXD2 468 aaKnown RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 VPS39Q96JC1 886 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 WDR11Q9BZH6 1224 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PSMC3IPQ9P2W1 217 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 M0R3G1 203 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 ORC4O43929 436 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 BNIP3LO60238 219 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 TSC22D2O75157 780 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 TYK2P29597 1187 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 PRPF18Q99633 342 aaKnown RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 FSD1LQ9BXM9 530 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 MANSC1Q9H8J5 431 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 H2AFXP16104 143 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 STX3Q13277 289 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 TMEM270Q6UE05 265 aa17.07■□□□□ 0.32
SHANK1-204ENST00000391814 FAM193BQ96PV7 902 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-204ENST00000391814 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 HORMAD1Q86X24 394 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 KCNK16Q96T55 309 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 MRPL1Q9BYD6 325 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 ISCUQ9H1K1 167 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 PCMTD2Q9NV79 361 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 TMA7Q9Y2S6 64 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 DTNAQ9Y4J8 743 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 ASAP2O43150 1006 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 LIFRP42702 1097 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 INPP5DQ92835 1189 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 POLR1AO95602 1720 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 INO80B-WBP1J3KQ70 363 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 INO80BQ9C086 356 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 DDX56Q9NY93 547 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 SENP1Q9P0U3 644 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 ANGPT2O15123 496 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 EIF2B2P49770 351 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 ZNF786Q8N393 782 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 LRRC4Q9HBW1 653 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 MCM8Q9UJA3 840 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 UBE4BO95155 1302 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 CLDN3O15551 220 aa17.06■□□□□ 0.32
SHANK1-204ENST00000391814 TTC33Q6PID6 262 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 SYDE1Q6ZW31 735 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-204ENST00000391814 MYO1GB0I1T2 1018 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 ZNF189O75820 626 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-204ENST00000391814 CCND2P30279 289 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
SHANK1-204ENST00000391814 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 CMTM5Q96DZ9 223 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 VPS50Q96JG6 964 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 OSBPL8Q9BZF1 889 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 FAM153AQ9UHL3 310 aa17.05■□□□□ 0.32
SHANK1-204ENST00000391814 LBRQ14739 615 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms