RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 TOX4O94842 621 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 KRT18P05783 430 aaKnown RBP4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 MYL1P05976 194 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 MAP2K6P52564 334 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 NKX6-1P78426 367 aaPredicted RBP4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 UBE4AQ14139 1066 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 VMACQ2NL98 169 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 PPP4R3AQ6IN85 833 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 FRMD5Q7Z6J6 570 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 DENND1CQ8IV53 801 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 KBTBD2Q8IY47 623 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 CCDC146Q8IYE0 955 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 GRAMD1CQ8IYS0 662 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 CMTM4Q8IZR5 234 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 ZGPATQ8N5A5 531 aaKnown RBP4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 PLBD2Q8NHP8 589 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 IFI44Q8TCB0 444 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 KAT5Q92993 513 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 BORCS6Q96GS4 357 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 CGRRF1Q99675 332 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 KCNH6Q9H252 994 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 FAM30AQ9NZY2 134 aa4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
RNU6-278P-201ENST00000390945 NT5C1B-RDH14C9J2C7 533 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 TPP1O14773 563 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 ADCY6O43306 1168 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 B4GALT4O60513 344 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 CNOT4O95628 575 aaKnown RBP4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 RHCEP18577 417 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 CFPP27918 469 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 RHDQ02161 417 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 DUSP8Q13202 625 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 SAFB2Q14151 953 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 ANO6Q4KMQ2 910 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 FAM47AQ5JRC9 791 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 TCERG1LQ5VWI1 586 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 NPNTQ6UXI9 565 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 GPR155Q7Z3F1 870 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 CASKIN2Q8WXE0 1202 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 GCDHQ92947 438 aaPredicted RBP4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 TTC17Q96AE7 1141 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 SAMD11Q96NU1 681 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 PDCD2LQ9BRP1 358 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 SEC61A2Q9H9S3 476 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 TLR9Q9NR96 1032 aa4.38□□□□□ -1.71
RNU6-278P-201ENST00000390945 DTNBO60941 627 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ITGA10O75578 1167 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 RPLP2P05387 115 aaKnown RBP4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 C8AP07357 584 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 GYPEP15421 78 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ALOX15P16050 662 aaPredicted RBP4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 HTR1BP28222 390 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 PCSK1P29120 753 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ECHS1P30084 290 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 IL12RB1P42701 662 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 BPIFB4P59827 614 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 CTXN1P60606 82 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 PPP2CBP62714 309 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 PPP2CAP67775 309 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 TLE1Q04724 770 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 SP140Q13342 867 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 MRPL49Q13405 166 aaKnown RBP4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 SNAPC2Q13487 334 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 MTM1Q13496 603 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 KHDC1Q4VXA5 237 aaKnown RBP4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 THEMIS2Q5TEJ8 643 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 OTUD7BQ6GQQ9 843 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 CCAR1Q8IX12 1150 aaKnown RBP4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 RHOT1Q8IXI2 618 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 DRC7Q8IY82 874 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ZDHHC14Q8IZN3 488 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 PQLC1Q8N2U9 271 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ANKRD53Q8N9V6 530 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 C3orf20Q8ND61 904 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 KLHDC4Q8TBB5 520 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 ZNF480Q8WV37 535 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 CLPTM1LQ96KA5 538 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 MANSC1Q9H8J5 431 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 POLHQ9Y253 713 aa4.37□□□□□ -1.71
RNU6-278P-201ENST00000390945 PRSS29PA6NIE9 313 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 APAF1O14727 1248 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 HOXA3O43365 443 aaPredicted RBP4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 SLC26A4O43511 780 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 PRAMEF4O60810 478 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 SLC5A1P13866 664 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 DDCP20711 480 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 KCNC1P48547 511 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 EPHB4P54760 987 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 RRADP55042 308 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 GPSM2P81274 684 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 NOGQ13253 232 aa4.36□□□□□ -1.71
RNU6-278P-201ENST00000390945 SEMA5AQ13591 1074 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms