RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 HAS1Q92839 578 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ERCC4Q92889 916 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 E2F7Q96AV8 911 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 PGBD4Q96DM1 585 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 MRPL4Q9BYD3 311 aaKnown RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC12A5Q9H2X9 1139 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 PRDM12Q9H4Q4 367 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZMAT4Q9H898 229 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 NCOA5Q9HCD5 579 aaKnown RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 VTA1Q9NP79 307 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 CASS4Q9NQ75 786 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ING3Q9NXR8 418 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 OBP2AQ9NY56 170 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 KCMF1Q9P0J7 381 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 FNIP2Q9P278 1114 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SAE1Q9UBE0 346 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 DNAI1Q9UI46 699 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 PACSIN3Q9UKS6 424 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 REXO2Q9Y3B8 237 aaKnown RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 DAAM1Q9Y4D1 1078 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 EPN1Q9Y6I3 576 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SALL3Q9BXA9 1300 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ALG1L2C9J202 215 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 M0R2C6 588 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 LEFTY2O00292 366 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MTSS1O43312 755 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 HOXA3O43365 443 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 TGM5O43548 720 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 NPTXRO95502 500 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ITGB1P05556 798 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 KRT18P05783 430 aaKnown RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MYL1P05976 194 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 GAAP10253 952 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZEB1P37275 1124 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 C21orf58P58505 322 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 HHEXQ03014 270 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 FOXI1Q12951 378 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 STRN3Q13033 797 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 PIN1Q13526 163 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 SPIDRQ14159 915 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 STAT4Q14765 748 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 VPS72Q15906 364 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 DGKDQ16760 1214 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 TMEM95Q3KNT9 176 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 FAM102BQ5T8I3 360 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZCCHC8Q6NZY4 707 aaKnown RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 SLC4A10Q6U841 1118 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 LRRC55Q6ZSA7 311 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 DGKHQ86XP1 1220 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 CMTM4Q8IZR5 234 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MSL3Q8N5Y2 521 aaKnown RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MAGEB6Q8N7X4 407 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZSWIM2Q8NEG5 633 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ATL2Q8NHH9 583 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 PNISRQ8TF01 805 aaKnown RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 JPH3Q8WXH2 748 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 GFM2Q969S9 779 aaKnown RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MTMR8Q96EF0 704 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 MAGEB10Q96LZ2 347 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 NEU1Q99519 415 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ELF4Q99607 663 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ADAM2Q99965 735 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 TCF25Q9BQ70 676 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 BOCQ9BWV1 1114 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZNF700Q9H0M5 742 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 ANLNQ9NQW6 1124 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 H2AFY2Q9P0M6 372 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 FBXO9Q9UK97 447 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 TRHDEQ9UKU6 1024 aa2.77□□□□□ -1.97
SNORA40.19-201ENST00000390846 LCHNA4D1U4 455 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 MARCH11A6NNE9 402 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 A6NNZ2 444 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 VSTM5A8MXK1 200 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 NEMP1O14524 444 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 GPR39O43194 453 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 OPHN1O60890 802 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 H2AFYO75367 372 aaKnown RBP2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 C1QL1O75973 258 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZNF37AP17032 561 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZSCAN20P17040 1043 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 NAT1P18440 290 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 TRAPPC10P48553 1259 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 PTH2RP49190 550 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 KIF11P52732 1056 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 CD69Q07108 199 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ITKQ08881 620 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 CRHR2Q13324 411 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 GRM3Q14832 879 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ODF1Q14990 250 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 EPHA7Q15375 998 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 INAVAQ3KP66 663 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 TUBB8Q3ZCM7 444 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZBTB41Q5SVQ8 909 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 ZNF362Q5T0B9 420 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 NXNQ6DKJ4 435 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 SLFN12LQ6IEE8 588 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 PPP4R4Q6NUP7 873 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 SYNPOQ8N3V7 929 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 C2orf69Q8N8R5 385 aa2.76□□□□□ -1.97
SNORA40.19-201ENST00000390846 CALML6Q8TD86 181 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms