RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NYAP2Q9P242 653 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 FNIP2Q9P278 1114 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 IGSF9Q9P2J2 1179 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 MYOTQ9UBF9 498 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 WNT16Q9UBV4 365 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 RCAN3Q9UKA8 241 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAM21Q9UKJ8 722 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 WWC3Q9ULE0 1092 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PPM1HQ9ULR3 514 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 MAGED2Q9UNF1 606 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 CELA1Q9UNI1 258 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 MINPP1Q9UNW1 487 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 TBC1D2BQ9UPU7 963 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 WASF3Q9UPY6 502 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 COA3Q9Y2R0 106 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDHB12Q9Y5F1 795 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 NOX1Q9Y5S8 564 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PRSS21Q9Y6M0 314 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ZHX2Q9Y6X8 837 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 HELZ2Q9BYK8 2649 aaKnown RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 FLG2Q5D862 2391 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 USP24Q9UPU5 2620 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 COL5A2P05997 1499 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZMYM2Q9UBW7 1377 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 IGLV3-10A0A075B6K4 115 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 A0A0G2JNJ9 132 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NPHP3-ACAD11A0A0J9YXS1 232 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 C7orf72A4D263 438 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RSPH10B2B2RC85 870 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TARM1B6A8C7 271 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF814B7Z6K7 855 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TISP43B9A030 160 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L15C9J2P7 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PRRT4C9JH25 899 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L13C9JLJ4 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L12C9JPN9 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L11C9JVI0 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L21D6R901 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L18D6R9N7 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L22D6RA61 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L17D6RBQ6 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L19D6RCP7 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L20D6RJB6 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 H0Y8X5 98 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 BMPR1BO00238 502 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SUPT5HO00267 1087 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FOXN3O00409 490 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ENC1O14682 589 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SCAMP3O14828 347 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RGS13O14921 159 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAMTS3O15072 1205 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 LATO43561 262 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 BUB3O43684 328 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PPP1R11O60927 126 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PAGE1O75459 146 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CLEC3AO75596 197 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DNAJB5O75953 348 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ARIH2O95376 493 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 IL18BPO95998 194 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 HNRNPCP07910 306 aaKnown RBP eCLIP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RSPH10BP0C881 870 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CFC1BP0CG36 223 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CFC1P0CG37 223 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ARP10275 920 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 COL6A2P12110 1019 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CD99P14209 185 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 IFNGR1P15260 489 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GATA1P15976 413 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF26P17031 533 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 UBTFP17480 764 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PAMP19021 973 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PLCG1P19174 1290 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 EN2P19622 333 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SREBF1P36956 1147 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ADCY8P40145 1251 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 IARSP41252 1262 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 FOLR3P41439 243 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GRIA3P42263 894 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 GJA8P48165 433 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CDK8P49336 464 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SEPHS1P49903 392 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ADCY7P51828 1080 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 MAPK10P53779 464 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 EPHA5P54756 1037 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DSCR9P59020 149 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 BPIFB4P59827 614 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RNASE9P60153 205 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RBM6P78332 1123 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ATP2C1P98194 919 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 PFKPQ01813 784 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 NHLH2Q02577 135 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 CKAP4Q07065 602 aaKnown RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 ACSM2AQ08AH3 577 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L24Q0WX57 530 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 DMP1Q13316 513 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TCIRG1Q13488 830 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 SPIDRQ14159 915 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 RFTN1Q14699 578 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms