RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 USP17L8P0C7I0 530 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SMIM18P0DKX4 95 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SNHG28P0DPA3 235 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 IMPDH2P12268 514 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CHRNA3P32297 505 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SOX5P35711 763 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 COILP38432 576 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 IL6STP40189 918 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 GRIA2P42262 883 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TECP42680 631 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MAGEA8P43361 318 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SLCO1A2P46721 670 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 GYG1P46976 350 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CASP4P49662 377 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 NEK3P51956 506 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PLTPP55058 493 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MECOMQ03112 1051 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ZNF211Q13398 564 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 LSAMPQ13449 338 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CUL3Q13618 768 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PTK6Q13882 451 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 HNRNPDQ14103 355 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 UBE4AQ14139 1066 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CTTNQ14247 550 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TNIP1Q15025 636 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 LRRC14Q15048 493 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 RASA2Q15283 850 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 EXOC3L4Q17RC7 722 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CLEC16AQ2KHT3 1053 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 LETM2Q2VYF4 491 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CNPY1Q3B7I2 92 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 WDR72Q3MJ13 1102 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CERKLQ49MI3 558 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PLEKHG4Q58EX7 1191 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 C1QTNF12Q5T7M4 302 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SUSD4Q5VX71 490 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TMEM154Q6P9G4 183 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DSTYKQ6XUX3 929 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 BRINP3Q76B58 766 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CYFIP1Q7L576 1253 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 HEATR3Q7Z4Q2 680 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SDCCAG8Q86SQ7 713 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DAAM2Q86T65 1068 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TDRPQ86YL5 185 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SLC13A5Q86YT5 568 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 RBBP8NLQ8NC74 664 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SLC44A5Q8NCS7 719 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SLC35G2Q8TBE7 412 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 FAM81AQ8TBF8 368 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ZNF398Q8TD17 642 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CABLES1Q8TDN4 633 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MZB1Q8WU39 189 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 U2AF1L4Q8WU68 220 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MAIP1Q8WWC4 291 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DNAJC9Q8WXX5 260 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PIGBQ92521 554 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SPOCK2Q92563 424 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PTPRN2Q92932 1015 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ARHGEF2Q92974 986 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SKA1Q96BD8 255 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 GRAMD1AQ96CP6 724 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ERP27Q96DN0 273 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DTNBP1Q96EV8 351 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CALML4Q96GE6 196 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 NGLY1Q96IV0 654 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 FAM84BQ96KN1 310 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 RUNDC3BQ96NL0 473 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 C8orf37Q96NL8 207 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PLEKHG4BQ96PX9 1271 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 RAB3IPQ96QF0 476 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TGS1Q96RS0 853 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 NUDCD1Q96RS6 583 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 FIZ1Q96SL8 496 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 P2RX7Q99572 595 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TSG101Q99816 390 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TMEM47Q9BQJ4 181 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ZSWIM1Q9BR11 485 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 POLR3CQ9BUI4 534 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MXD3Q9BW11 206 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CADM1Q9BY67 442 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TRIM31Q9BZY9 425 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 FAM192AQ9GZU8 254 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ZCWPW1Q9H0M4 648 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 EPB41L1Q9H4G0 881 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 BCAS3Q9H6U6 928 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 LRRC19Q9H756 370 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 METTL14Q9HCE5 456 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SLCO1B3Q9NPD5 702 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DMAP1Q9NPF5 467 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SAR1AQ9NR31 198 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 IRAK4Q9NWZ3 460 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 WHRNQ9P202 907 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ARPP21Q9UBL0 812 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PARP2Q9UGN5 583 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TRMT112Q9UI30 125 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 AMFRQ9UKV5 643 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ZNF510Q9Y2H8 683 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms