RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 ZBTB39O15060 712 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 CLDN3O15551 220 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 TPM4P67936 248 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 ZNF396Q96N95 335 aaPredicted RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 LRFN3Q9BTN0 628 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 SCN5AQ14524 2016 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 K7ENM7 598 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 DPYSL4O14531 572 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 SPATA31D3P0C874 917 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 GLRA4Q5JXX5 417 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 CLLU1OSQ5K130 101 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 SPATA31D4Q6ZUB0 917 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 GET4Q7L5D6 327 aaPredicted RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 GPBP1Q86WP2 473 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 YAF2Q8IY57 180 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 HAS1Q92839 578 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 NID2Q14112 1375 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 HIDE1A8MVS5 230 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 ZNF623O75123 536 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 CTSAP10619 480 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 CAPSQ13938 189 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 ATOH1Q92858 354 aaPredicted RBP8.6□□□□□ -1.03
FAM49A-201ENST00000381323 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 GCNAQ96QF7 691 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 PRRX2Q99811 253 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 EXOC7Q9UPT5 735 aa8.6□□□□□ -1.03
FAM49A-201ENST00000381323 OFD1O75665 1012 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 GLRA2P23416 452 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 FAM189BP81408 668 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 FUT10Q6P4F1 479 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 METTL23Q86XA0 190 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 RABGGTAQ92696 567 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 NXF3Q9H4D5 531 aaKnown RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 RNF19AQ9NV58 838 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 ARL5CA6NH57 179 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 ADAMTS3O15072 1205 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 SLC16A4O15374 487 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 DSC3Q14574 896 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 CYP4A22Q5TCH4 519 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 MAN1C1Q9NR34 630 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 ADAM28Q9UKQ2 775 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 TCF20Q9UGU0 1960 aaKnown RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 KIAA1217Q5T5P2 1943 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 E9PMD0 336 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 H7C4K7 107 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 TSPAN1O60635 241 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 RECQL4O94761 1208 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 FDPSP14324 419 aaKnown RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 CDC25AP30304 524 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 TUSC3Q13454 348 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 PSMD5Q16401 504 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 RRAGBQ5VZM2 374 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 CRYGNQ8WXF5 182 aa8.59□□□□□ -1.03
FAM49A-201ENST00000381323 RPF1Q9H9Y2 349 aaKnown RBP8.59□□□□□ -1.03
FAM49A-201ENST00000381323 LTBP2Q14767 1821 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 SFI1A8K8P3 1242 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 ZBTB42B2RXF5 422 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 ACKR2O00590 384 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 TBX10O75333 385 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 CTDNEP1O95476 244 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 DLX2Q07687 328 aaPredicted RBP8.59□□□□□ -1.04
FAM49A-201ENST00000381323 APPL2Q8NEU8 664 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.04
FAM49A-201ENST00000381323 TTPALQ9BTX7 342 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 EIF2AQ9BY44 585 aaKnown RBP8.59□□□□□ -1.04
FAM49A-201ENST00000381323 LRRC27Q9C0I9 530 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 DNAJB4Q9UDY4 337 aa8.59□□□□□ -1.04
FAM49A-201ENST00000381323 HIP1RO75146 1068 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 EYA4O95677 639 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 SOD2P04179 222 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 MSNP26038 577 aaKnown RBP8.58□□□□□ -1.04
FAM49A-201ENST00000381323 ZP2Q05996 745 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 PDIA5Q14554 519 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 DNTTIP2Q5QJE6 756 aaKnown RBP8.58□□□□□ -1.04
FAM49A-201ENST00000381323 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
FAM49A-201ENST00000381323 MBOAT7Q96N66 472 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 KIFC3Q9BVG8 833 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.58□□□□□ -1.04
FAM49A-201ENST00000381323 MED24O75448 989 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 LYPLA2O95372 231 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 EPCAMP16422 314 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 MUTP22033 750 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 ABCD1P33897 745 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 STAT6P42226 847 aa8.58□□□□□ -1.04
FAM49A-201ENST00000381323 ZNF280BQ86YH2 543 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms