RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 TRIM51Q9BSJ1 452 aa18.98■□□□□ 0.63
UBL3-201ENST00000380680 SLITRK3O94933 977 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PPP6R3Q5H9R7 873 aaPredicted RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 RHOT1Q8IXI2 618 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 CCNYQ8ND76 341 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 CCHCR1Q8TD31 782 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 MCUR1Q96AQ8 359 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 CALR3Q96L12 384 aaKnown RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 FUT8Q9BYC5 575 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 RGPD2P0DJD1 1756 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 A0A0U1RQJ8 604 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 FAM187AA6NFU0 413 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PRKCBP05771 671 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PMS2P54278 862 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 BACE1P56817 501 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 WDR72Q3MJ13 1102 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PAPD7Q5XG87 772 aaKnown RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 SH2D3CQ8N5H7 860 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 OLFML3Q9NRN5 406 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 SUN1O94901 812 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 ACTR2P61160 394 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 MMGT1Q8N4V1 131 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 USP38Q8NB14 1042 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 VIPAS39Q9H9C1 493 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 LRRC4Q9HBW1 653 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 DMGDHQ9UI17 866 aaKnown RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 TBX20Q9UMR3 447 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PSMC1P62191 440 aaKnown RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 BEND6Q5SZJ8 279 aaPredicted RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 XRRA1Q6P2D8 792 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 CCDC62Q6P9F0 684 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PDIK1LQ8N165 341 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 C4orf32Q8N8J7 132 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 HNRNPLLQ8WVV9 542 aaKnown RBP18.97■□□□□ 0.63
UBL3-201ENST00000380680 RILPQ96NA2 401 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 PDCD2LQ9BRP1 358 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 NACA2Q9H009 215 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
UBL3-201ENST00000380680 MEIS2O14770 477 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 MKRN4PQ13434 485 aaPredicted RBP18.96■□□□□ 0.63
UBL3-201ENST00000380680 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 TMEM8AQ9HCN3 771 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 SAYSD1Q9NPB0 183 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 RGPD1P0DJD0 1748 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 HLA-DRAP01903 254 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 NCOA4Q13772 614 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 MMTAG2Q9BU76 263 aaKnown RBP18.96■□□□□ 0.63
UBL3-201ENST00000380680 IFT122Q9HBG6 1241 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 IGSF9BQ9UPX0 1349 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 KRT14P02533 472 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 PLA2G4AP47712 749 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 PDZD4Q76G19 769 aaPredicted RBP18.96■□□□□ 0.63
UBL3-201ENST00000380680 ZNF571Q7Z3V5 609 aaPredicted RBP18.96■□□□□ 0.63
UBL3-201ENST00000380680 PYROXD1Q8WU10 500 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 GPRASP2Q96D09 838 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 MTMR8Q96EF0 704 aa18.96■□□□□ 0.63
UBL3-201ENST00000380680 SUCLA2Q9P2R7 463 aaPredicted RBP18.96■□□□□ 0.63
UBL3-201ENST00000380680 COMTP21964 271 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 VPS52Q8N1B4 723 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBL3-201ENST00000380680 GDAP1Q8TB36 358 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 THAP2Q9H0W7 228 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 UVRAGQ9P2Y5 699 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 HPCAL4Q9UM19 191 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 KCPQ6ZWJ8 1503 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 ARHGEF18Q6ZSZ5 1173 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 TPCN2Q8NHX9 752 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 STMN2Q93045 179 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 SETD1AO15047 1707 aaKnown RBP18.95■□□□□ 0.62
UBL3-201ENST00000380680 CLTAP09496 248 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 MSH2P43246 934 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 TNFAIP2Q03169 654 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 DHX34Q14147 1143 aaKnown RBP18.95■□□□□ 0.62
UBL3-201ENST00000380680 ZNF526Q8TF50 670 aaPredicted RBP18.95■□□□□ 0.62
UBL3-201ENST00000380680 ATP6V1G3Q96LB4 118 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 CELF4Q9BZC1 486 aaKnown RBP18.95■□□□□ 0.62
UBL3-201ENST00000380680 TRAF3IP3Q9Y228 551 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 P4HA2O15460 535 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 ARL4AP40617 200 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 CENPUQ71F23 418 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 LRRC71Q8N4P6 559 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 STRIP2Q9ULQ0 834 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 L1RE1Q9UN81 338 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 PCDHB2Q9Y5E7 798 aa18.95■□□□□ 0.62
UBL3-201ENST00000380680 PI4K2BG5E9Z4 385 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 ABL1P00519 1130 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 MUTP22033 750 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 CA4P22748 312 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 NPTX2P47972 431 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 SHROOM1Q2M3G4 852 aaPredicted RBP18.94■□□□□ 0.62
UBL3-201ENST00000380680 KIAA1755Q5JYT7 1200 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 MRIQ9BWK5 157 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 SSX2IPQ9Y2D8 614 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 KIAA0391O15091 583 aaKnown RBP18.94■□□□□ 0.62
UBL3-201ENST00000380680 KCNA1Q09470 495 aa18.94■□□□□ 0.62
UBL3-201ENST00000380680 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
UBL3-201ENST00000380680 RSRC2Q7L4I2 434 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms