RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 GOLGA8IPA6NC78 632 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 GOLGA8JA6NMD2 632 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 PLSCR1O15162 318 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 RGS16O15492 202 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 TBC1D12O60347 775 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 CYP1A2P05177 515 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 PYGMP11217 842 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 MTMR1Q13613 665 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 SLC29A2Q14542 456 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 QPCTQ16769 361 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 GKAP1Q5VSY0 366 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 SLC47A2Q86VL8 602 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 IL31RAQ8NI17 732 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 RNF25Q96BH1 459 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 ACTR5Q9H9F9 607 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 UBIAD1Q9Y5Z9 338 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 ATMINO43313 823 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 MMEP08473 750 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 COILP38432 576 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 SLMAPQ14BN4 828 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 ERMARDQ5T6L9 678 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 PCNX4Q63HM2 1172 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 TTC27Q6P3X3 843 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 SLC13A5Q86YT5 568 aaPredicted RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 MDM1Q8TC05 714 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 CD101Q93033 1021 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 ZNF653Q96CK0 615 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 KREMEN1Q96MU8 473 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 XPO6Q96QU8 1125 aaKnown RBP17.54■□□□□ 0.4
VPS16-203ENST00000380469 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 PCDHA3Q9Y5H8 950 aa17.54■□□□□ 0.4
VPS16-203ENST00000380469 NFIBO00712 420 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 APBA3O96018 575 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 ADRB2P07550 413 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SMTNP53814 917 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 NCKAP1LP55160 1127 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 ADCY2Q08462 1091 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SNRNP35Q16560 246 aaKnown RBP17.53■□□□□ 0.4
VPS16-203ENST00000380469 CYP1B1Q16678 543 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 KRT39Q6A163 491 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SHC3Q92529 594 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 KIFAP3Q92845 792 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 TATDN2Q93075 761 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 CHMP6Q96FZ7 201 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 GLIS2Q9BZE0 524 aaPredicted RBP17.53■□□□□ 0.4
VPS16-203ENST00000380469 UVRAGQ9P2Y5 699 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 BRWD3Q6RI45 1802 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 PASKQ96RG2 1323 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 PHF20L1A8MW92 1017 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 ALAS1P13196 640 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 PDE6CP51160 858 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 RWDD2BP57060 319 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 FMO1Q01740 532 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 C4orf19Q8IY42 314 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 CLEC4DQ8WXI8 215 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 CCDC127Q96BQ5 260 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SELENOSQ9BQE4 189 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 SH2D3AQ9BRG2 576 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 STMN4Q9H169 189 aaPredicted RBP17.53■□□□□ 0.4
VPS16-203ENST00000380469 SEMA4AQ9H3S1 761 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
VPS16-203ENST00000380469 ZNF536O15090 1300 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 SMIM23A6NLE4 172 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 BACH1O14867 736 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.4
VPS16-203ENST00000380469 ASNSP08243 561 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CYP11B1P15538 503 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CDR2Q01850 454 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CYFIP1Q7L576 1253 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 TRMT1LQ7Z2T5 733 aaKnown RBP17.52■□□□□ 0.4
VPS16-203ENST00000380469 CBWD2Q8IUF1 395 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CCDC13Q8IYE1 715 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 ZDHHC14Q8IZN3 488 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 CCDC114Q96M63 670 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 FAM129AQ9BZQ8 928 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
VPS16-203ENST00000380469 RAD17O75943 681 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 AGTP01019 485 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 CHN1P15882 459 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 DRD4P21917 467 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 PSMC5P62195 406 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.39
VPS16-203ENST00000380469 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 SEMA4DQ92854 862 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 BTBD6Q96KE9 485 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 NT5C1BQ96P26 610 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 CEP89Q96ST8 783 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 TMEM8AQ9HCN3 771 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 ACP6Q9NPH0 428 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 TBX20Q9UMR3 447 aa17.52■□□□□ 0.39
VPS16-203ENST00000380469 RARAP10276 462 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 RARGP13631 454 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms