RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SGPL1O95470 568 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 ARMC9Q7Z3E5 817 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 METTL14Q9HCE5 456 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 TMEM59LQ9UK28 342 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 COMTP21964 271 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 CCND1P24385 295 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 PMS2P54278 862 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 POLE2P56282 527 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 BIRC3Q13489 604 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 DPY19L2P1Q6NXN4 242 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 SYCE1Q8N0S2 351 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 RFFLQ8WZ73 363 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 TOPORSQ9NS56 1045 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 SWAP70Q9UH65 585 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 ZMYND8Q9ULU4 1186 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 HIP1RO75146 1068 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 KRT5P13647 590 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 NCALDP61601 193 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 ORC2Q13416 577 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 LXNQ9BS40 222 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
PRPF40B-202ENST00000380281 RNF8O76064 485 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 EYA4O95677 639 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 SLMAPQ14BN4 828 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 CCDC137Q6PK04 289 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 ERP44Q9BS26 406 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 SAMD15Q9P1V8 674 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 ASIC3Q9UHC3 531 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 LRRD1A4D1F6 860 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 SLC16A4O15374 487 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 CLDN3O15551 220 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 PIAS1O75925 651 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 PYGMP11217 842 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 PCK1P35558 622 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 SYT15Q9BQS2 421 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 MYO3BQ8WXR4 1341 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 PITPNM2Q9BZ72 1349 aa13.35□□□□□ -0.27
PRPF40B-202ENST00000380281 TTC36A6NLP5 189 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 CCDC188H7C350 402 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 PAEPP09466 180 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 RARAP10276 462 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 MYCLP12524 364 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 NPEPPSP55786 919 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 ANO7Q6IWH7 933 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 TTC27Q6P3X3 843 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 NEK9Q8TD19 979 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 ZNF317Q96PQ6 595 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 FAM129AQ9BZQ8 928 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 LMNB1P20700 586 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 PEX3P56589 373 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 HYIQ5T013 277 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 SPATA21Q7Z572 469 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 KLHL11Q9NVR0 708 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 DDX3YO15523 660 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms