RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ZNF473Q8WTR7 871 aaKnown RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 ZC3H15Q8WU90 426 aaKnown RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 STMN3Q9NZ72 180 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 KRT14P02533 472 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 C1orf146Q5VVC0 180 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 PADI6Q6TGC4 694 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 FGD4Q96M96 766 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 NUP85Q9BW27 656 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 SENP1Q9P0U3 644 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 FIS1Q9Y3D6 152 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 POTECB2RU33 542 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 CAPN1P07384 714 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 PRDX5P30044 214 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 OCRLQ01968 901 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 FRMD5Q7Z6J6 570 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 ZIM3Q96PE6 472 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 KPNA7A9QM74 516 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 ORC4O43929 436 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 MYLK4Q86YV6 388 aaPredicted RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 SNF8Q96H20 258 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM15Q9C019 465 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 ECT2Q9H8V3 914 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 CHEK2O96017 543 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 CSF1RP07333 972 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 PYGBP11216 843 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 EIF2AK2P19525 551 aaKnown RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 VAMP7P51809 220 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 SIX6OS1Q8N1H7 587 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 HIPK4Q8NE63 616 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 HSD3B7Q9H2F3 369 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 MRPL40Q9NQ50 206 aaKnown RBP15.38■□□□□ 0.05
PRDM16-203ENST00000378391 AMACRQ9UHK6 382 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
PRDM16-203ENST00000378391 GSTA4O15217 222 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 SKA2Q8WVK7 121 aaPredicted RBP15.37■□□□□ 0.05
PRDM16-203ENST00000378391 CYP26B1Q9NR63 512 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 RINLQ6ZS11 566 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 HSPH1Q92598 858 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM9Q9C026 710 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
PRDM16-203ENST00000378391 DBNDD1Q9H9R9 158 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 MLXIPLQ9NP71 852 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 ASNSD1Q9NWL6 643 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 AP2B1P63010 937 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 ARL13BQ3SXY8 428 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 ENOSF1Q7L5Y1 443 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 METTL23Q86XA0 190 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 GLYCTKQ8IVS8 523 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 RHOT1Q8IXI2 618 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 TBC1D22BQ9NU19 505 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 A0A087X0B3 334 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 AGTP01019 485 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 MYBL1P10243 752 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 CCNA1P78396 465 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
PRDM16-203ENST00000378391 PDIA5Q14554 519 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRDM16-203ENST00000378391 RNPC3Q96LT9 517 aaKnown RBP15.37■□□□□ 0.05
PRDM16-203ENST00000378391 C11orf70Q9BRQ4 267 aa15.37■□□□□ 0.05
PRDM16-203ENST00000378391 TAC1P20366 129 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 LSP1P33241 339 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 HSPA9P38646 679 aaKnown RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 ATP11CQ8NB49 1132 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■■ 59.5
PRDM16-203ENST00000378391 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DCTN4Q9UJW0 460 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 RASSF10A6NK89 507 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 ZBBXA8MT70 800 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 STAT4Q14765 748 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 ZNF189O75820 626 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TBXAS1P24557 533 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 SOX5P35711 763 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 AARSP49588 968 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 OSTNP61366 133 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TEDDM1Q5T9Z0 273 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 ACAD11Q709F0 780 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 RNF25Q96BH1 459 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms