RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 CACNG4Q9UBN1 327 aa16.96■□□□□ 0.31
RAB4B-202ENST00000378307 PARP2Q9UGN5 583 aa16.96■□□□□ 0.31
RAB4B-202ENST00000378307 BARX2Q9UMQ3 279 aaPredicted RBP16.96■□□□□ 0.31
RAB4B-202ENST00000378307 GIT1Q9Y2X7 761 aa16.96■□□□□ 0.31
RAB4B-202ENST00000378307 BDP1A6H8Y1 2624 aa16.96■□□□□ 0.3
RAB4B-202ENST00000378307 K7ERI5 159 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 TNFRSF10AO00220 468 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 N4BP3O15049 544 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 ALDH2P05091 517 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 PLCG1P19174 1290 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 EFNA5P52803 228 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 MCM6Q14566 821 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 PDE12Q6L8Q7 609 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 MRPL43Q8N983 215 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 NTPCRQ9BSD7 190 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 ZBP1Q9H171 429 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 NGRNQ9NPE2 291 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 MARCH5Q9NX47 278 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
RAB4B-202ENST00000378307 SRPRBQ9Y5M8 271 aaKnown RBP16.95■□□□□ 0.3
RAB4B-202ENST00000378307 C2orf71A6NGG8 1288 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 SLC16A4O15374 487 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 CXCL14O95715 111 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 NDUFV1P49821 464 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 ATF7IP2Q5U623 682 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
RAB4B-202ENST00000378307 TAS1R1Q7RTX1 841 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 DDX53Q86TM3 631 aaKnown RBP16.94■□□□□ 0.3
RAB4B-202ENST00000378307 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 KCTD17Q8N5Z5 321 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 CEP120Q8N960 986 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
RAB4B-202ENST00000378307 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 PPP2R3CQ969Q6 453 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 CALML4Q96GE6 196 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 DRC1Q96MC2 740 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 ACO2Q99798 780 aaKnown RBP16.94■□□□□ 0.3
RAB4B-202ENST00000378307 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 CCSER1Q9C0I3 900 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 PTPRHQ9HD43 1115 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 KMT5AQ9NQR1 393 aa16.94■□□□□ 0.3
RAB4B-202ENST00000378307 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
RAB4B-202ENST00000378307 PTGESO14684 152 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 MBTPS2O43462 519 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 SLC26A4O43511 780 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 RECQL4O94761 1208 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 PLS3P13797 630 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 OR1G1P47890 313 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 DMP1Q13316 513 aaPredicted RBP16.93■□□□□ 0.3
RAB4B-202ENST00000378307 PKP1Q13835 747 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 SMC1AQ14683 1233 aaKnown RBP16.93■□□□□ 0.3
RAB4B-202ENST00000378307 SLC39A14Q15043 492 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 TMEM132AQ24JP5 1023 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 LLGL2Q6P1M3 1020 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 FAM178BQ8IXR5 827 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 RAD54LQ92698 747 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 KHSRPQ92945 711 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAB4B-202ENST00000378307 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 PAAF1Q9BRP4 392 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 TIPINQ9BVW5 301 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 TARS2Q9BW92 718 aaKnown RBP16.93■□□□□ 0.3
RAB4B-202ENST00000378307 ZSCAN16Q9H4T2 348 aaPredicted RBP16.93■□□□□ 0.3
RAB4B-202ENST00000378307 TMEM134Q9H6X4 195 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 PHLPP2Q6ZVD8 1323 aa16.93■□□□□ 0.3
RAB4B-202ENST00000378307 ABLIM1O14639 778 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 EFEMP2O95967 443 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 CTSAP10619 480 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 NAB2Q15742 525 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 GPBP1Q86WP2 473 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 TMEM161BQ8NDZ6 487 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 SPIRE2Q8WWL2 714 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 ZBTB45Q96K62 511 aaPredicted RBP16.92■□□□□ 0.3
RAB4B-202ENST00000378307 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
RAB4B-202ENST00000378307 C17orf75Q9HAS0 396 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
RAB4B-202ENST00000378307 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 TNFSF13BQ9Y275 285 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 GDAQ9Y2T3 454 aa16.92■□□□□ 0.3
RAB4B-202ENST00000378307 A0A087X0B3 334 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 LILRB3O75022 631 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 CLASP2O75122 1294 aaKnown RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 MAPTP10636 758 aaKnown RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 PROZP22891 400 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 IGFBP6P24592 240 aaPredicted RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 CA8P35219 290 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 COASYQ13057 564 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 SMAD4Q13485 552 aaKnown RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 GIT2Q14161 759 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 SMAD2Q15796 467 aaKnown RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
RAB4B-202ENST00000378307 TMEM184AQ6ZMB5 413 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 ZBTB33Q86T24 672 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 SMRP1Q8NCR6 262 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
RAB4B-202ENST00000378307 ADPGKQ9BRR6 497 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms