RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 C5orf60A6NFR6 353 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 SCTRP47872 440 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 RARRES1P49788 294 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 SEL1L2Q5TEA6 688 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 GKAP1Q5VSY0 366 aaPredicted RBP21.89■■□□□ 1.09
CLN5-201ENST00000377453 CC2D2BQ6DHV5 1058 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 HAUS6Q7Z4H7 955 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 NLGN1Q8N2Q7 840 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 HERPUD2Q9BSE4 406 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 UBE4BO95155 1302 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 SYNGAP1Q96PV0 1343 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 RASSF9O75901 435 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 ACSL3O95573 720 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 CTNNA2P26232 953 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 VPS41P49754 854 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 LONRF1Q17RB8 773 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 C11orf63Q6NUN7 778 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 INTS8Q75QN2 995 aaKnown RBP21.88■■□□□ 1.09
CLN5-201ENST00000377453 HOOK3Q86VS8 718 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 SLC9A9Q8IVB4 645 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 XXYLT1Q8NBI6 393 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 CTNNAL1Q9UBT7 734 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 RASAL2Q9UJF2 1139 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 DIS3Q9Y2L1 958 aaKnown RBP21.88■■□□□ 1.09
CLN5-201ENST00000377453 MRPL11Q9Y3B7 192 aaKnown RBP21.88■■□□□ 1.09
CLN5-201ENST00000377453 RAD17O75943 681 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 NUDT17P0C025 328 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 SIX1Q15475 284 aaPredicted RBP21.88■■□□□ 1.09
CLN5-201ENST00000377453 ATRNL1Q5VV63 1379 aa21.88■■□□□ 1.09
CLN5-201ENST00000377453 RTN2O75298 545 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 CHRNA3P32297 505 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 COILP38432 576 aaPredicted RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 RASA3Q14644 834 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 SLC13A5Q86YT5 568 aaPredicted RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 HVCN1Q96D96 273 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 ZNF317Q96PQ6 595 aaPredicted RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 ACCSQ96QU6 501 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 ELAC2Q9BQ52 826 aaKnown RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 LARSQ9P2J5 1176 aaKnown RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 CCPG1Q9ULG6 757 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 DHX15O43143 795 aaKnown RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 SORBS3O60504 671 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 ENTPD3O75355 529 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 ADSSP30520 456 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 CHKAP35790 457 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 EIF3BP55884 814 aaKnown RBP21.87■■□□□ 1.09
CLN5-201ENST00000377453 FAM102BQ5T8I3 360 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 GPATCH11Q8N954 259 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 CD101Q93033 1021 aa21.87■■□□□ 1.09
CLN5-201ENST00000377453 CCDC169A6NNP5 214 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 RIPK2O43353 540 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 EIF2AK2P19525 551 aaKnown RBP21.86■■□□□ 1.09
CLN5-201ENST00000377453 ADCY1Q08828 1119 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 LMBRD2Q68DH5 695 aaPredicted RBP21.86■■□□□ 1.09
CLN5-201ENST00000377453 MRIQ9BWK5 157 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 CD2APQ9Y5K6 639 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 MMP13P45452 471 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 SMTNP53814 917 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 RNF207Q6ZRF8 634 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 PRUNE1Q86TP1 453 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 TAS1R2Q8TE23 839 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 CCT6BQ92526 530 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 CHST7Q9NS84 486 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 TELO2Q9Y4R8 837 aa21.86■■□□□ 1.09
CLN5-201ENST00000377453 SRRM3A6NNA2 597 aaPredicted RBP21.85■■□□□ 1.09
CLN5-201ENST00000377453 ATP9AO75110 1047 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 VIMP08670 466 aaKnown RBP21.85■■□□□ 1.09
CLN5-201ENST00000377453 PLS3P13797 630 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 FAM71AQ8IYT1 594 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 CEP89Q96ST8 783 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 INTS9Q9NV88 658 aaKnown RBP21.85■■□□□ 1.09
CLN5-201ENST00000377453 MIF4GDA9UHW6 222 aaKnown RBP21.85■■□□□ 1.09
CLN5-201ENST00000377453 O00370 1275 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 MRPS9P82933 396 aaKnown RBP21.85■■□□□ 1.09
CLN5-201ENST00000377453 CETN1Q12798 172 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 FAM228AQ86W67 206 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 PCYOX1Q9UHG3 505 aa21.85■■□□□ 1.09
CLN5-201ENST00000377453 HGSO14964 777 aaPredicted RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 MYCLP12524 364 aaPredicted RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 ALAS1P13196 640 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 CYP11B1P15538 503 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 YWHABP31946 246 aaKnown RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 AUHQ13825 339 aaKnown RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 TNIP1Q15025 636 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 PPP1R7Q15435 360 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 FAM133BQ5BKY9 247 aaKnown RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 SEPT14Q6ZU15 432 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 FUKQ8N0W3 1084 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 CHURC1Q8WUH1 139 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 ZKSCAN4Q969J2 545 aaPredicted RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 GGA2Q9UJY4 613 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 TP73O15350 636 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 P4HBP07237 508 aaKnown RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 CYB5D1Q6P9G0 228 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 SCLT1Q96NL6 688 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 CNOT10Q9H9A5 744 aaKnown RBP21.84■■□□□ 1.09
CLN5-201ENST00000377453 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 PFASO15067 1338 aa21.84■■□□□ 1.09
CLN5-201ENST00000377453 RASGRF2O14827 1237 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms