RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TTC12Q9H892 705 aaPredicted RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 UBN1Q9NPG3 1134 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 C2CD2LO14523 706 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 TEX28O15482 410 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 ARL2P36404 184 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 MXD4Q14582 209 aaPredicted RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 CWF19L1Q69YN2 538 aaKnown RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 NOTUMQ6P988 496 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 CCDC149Q6ZUS6 474 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 CMASQ8NFW8 434 aaPredicted RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 ATOH1Q92858 354 aaPredicted RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 CSRNP2Q9H175 543 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 MAN1C1Q9NR34 630 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 ST18O60284 1047 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 GFRA3O60609 400 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 URODP06132 367 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 ARF4P18085 180 aaPredicted RBP21.28■■□□□ 1
CBWD3-204ENST00000377349 OR1G1P47890 313 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 SCNN1GP51170 649 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 ASTLQ6HA08 431 aaPredicted RBP21.28■■□□□ 1
CBWD3-204ENST00000377349 NFKBIZQ9BYH8 718 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 IRF2BPLQ9H1B7 796 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 NXF3Q9H4D5 531 aaKnown RBP21.28■■□□□ 1
CBWD3-204ENST00000377349 RXFP1Q9HBX9 757 aa21.28■■□□□ 1
CBWD3-204ENST00000377349 EP300Q09472 2414 aaPredicted RBP21.27■■□□□ 1
CBWD3-204ENST00000377349 MYH15Q9Y2K3 1946 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 PROB1E7EW31 1015 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 INO80B-WBP1J3KQ70 363 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 B4GALT5O43286 388 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 PAPLNO95428 1278 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 NPR3P17342 541 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 GLRA2P23416 452 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 RARRES1P49788 294 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 OTOP3Q7RTS5 596 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 ACSF2Q96CM8 615 aaPredicted RBP21.27■■□□□ 1
CBWD3-204ENST00000377349 CHST7Q9NS84 486 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 ANKEF1Q9NU02 776 aa21.27■■□□□ 1
CBWD3-204ENST00000377349 NOTCH4Q99466 2003 aa21.27■□□□□ 0.99
CBWD3-204ENST00000377349 POTEMA6NI47 508 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 DGAT1O75907 488 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 GLUD2P49448 558 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 DSG1Q02413 1049 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 ZSCAN31Q96LW9 406 aaPredicted RBP21.26■□□□□ 0.99
CBWD3-204ENST00000377349 MTMR9Q96QG7 549 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 RHOBTB2Q9BYZ6 727 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 KCNK12Q9HB15 430 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 GIT1Q9Y2X7 761 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 ZNF292O60281 2723 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 CACNA1IQ9P0X4 2223 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 FANCMQ8IYD8 2048 aa21.26■□□□□ 0.99
CBWD3-204ENST00000377349 A0A087WWV3 80 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 ADH1AP07327 375 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 CLCN5P51795 746 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 TDGQ13569 410 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 TFDP1Q14186 410 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 ZNF174Q15697 407 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 CDR2LQ86X02 465 aaPredicted RBP21.25■□□□□ 0.99
CBWD3-204ENST00000377349 ZNF707Q96C28 371 aaPredicted RBP21.25■□□□□ 0.99
CBWD3-204ENST00000377349 B3GALT6Q96L58 329 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 LLPHQ9BRT6 129 aaKnown RBP21.25■□□□□ 0.99
CBWD3-204ENST00000377349 APOL6Q9BWW8 343 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 GPR62Q9BZJ7 368 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 DUSP12Q9UNI6 340 aa21.25■□□□□ 0.99
CBWD3-204ENST00000377349 SPDYE4A6NLX3 237 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 RFPL2O75678 378 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 AKAP5P24588 427 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 HMGN5P82970 282 aaKnown RBP21.24■□□□□ 0.99
CBWD3-204ENST00000377349 PIGOQ8TEQ8 1089 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 KIF2CQ99661 725 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 TMEM60Q9H2L4 133 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 WDR6Q9NNW5 1121 aaKnown RBP21.24■□□□□ 0.99
CBWD3-204ENST00000377349 SH2B1Q9NRF2 756 aaPredicted RBP21.24■□□□□ 0.99
CBWD3-204ENST00000377349 SSX2IPQ9Y2D8 614 aa21.24■□□□□ 0.99
CBWD3-204ENST00000377349 CCDC195A0A1B0GUA6 201 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 A0A1B0GUA9 196 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 PI15O43692 258 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 GLUD1P00367 558 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 SPATA31C1P0DKV0 1188 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 MYBP10242 640 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 NBL1P41271 181 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 ASCL5Q7RTU5 278 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 POLR3FQ9H1D9 316 aaPredicted RBP21.23■□□□□ 0.99
CBWD3-204ENST00000377349 UPF2Q9HAU5 1272 aaKnown RBP21.23■□□□□ 0.99
CBWD3-204ENST00000377349 GPRC5CQ9NQ84 441 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 FRYLO94915 3013 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 ZMYM2Q9UBW7 1377 aa21.23■□□□□ 0.99
CBWD3-204ENST00000377349 DMXL1Q9Y485 3027 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 NARSO43776 548 aaKnown RBP21.22■□□□□ 0.99
CBWD3-204ENST00000377349 FUT10Q6P4F1 479 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 SLC27A1Q6PCB7 646 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 POTEGQ6S5H5 508 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 MAEAQ7L5Y9 396 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 MFSD1Q9H3U5 465 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 CACNG4Q9UBN1 327 aa21.22■□□□□ 0.99
CBWD3-204ENST00000377349 CLUHO75153 1309 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 TTLL13PA6NNM8 815 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 USO1O60763 962 aaKnown RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 NPTXRO95502 500 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 SPATA31D3P0C874 917 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 AOC1P19801 751 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms