RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NIM1KQ8IY84 436 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 CACNA2D3Q8IZS8 1091 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 GPR88Q9GZN0 384 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 GJB6O95452 261 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 MTM1Q13496 603 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 SPOPLQ6IQ16 392 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 PRUNE1Q86TP1 453 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 HOOK3Q86VS8 718 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 THOC1Q96FV9 657 aaKnown RBP13.88□□□□□ -0.19
USP11-204ENST00000377107 CARD9Q9H257 536 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 STXBP5LQ9Y2K9 1186 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 PTENP60484 403 aa13.88□□□□□ -0.19
USP11-204ENST00000377107 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
USP11-204ENST00000377107 RANBP17Q9H2T7 1088 aaKnown RBP13.88□□□□□ -0.19
USP11-204ENST00000377107 A0A0A6YYK5 440 aaPredicted RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 LRRIQ4A6NIV6 560 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 CHN1P15882 459 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 ADCY8P40145 1251 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 EEPD1Q7L9B9 569 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 PRELID2Q8N945 189 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 KREMEN1Q96MU8 473 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 INTS9Q9NV88 658 aaKnown RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 TELO2Q9Y4R8 837 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 RTN2O75298 545 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 FAM107AO95990 144 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 NPTX2P47972 431 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 PLCB3Q01970 1234 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 GKAP1Q5VSY0 366 aaPredicted RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 SLFN11Q7Z7L1 901 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 MREGQ8N565 214 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 SYTL5Q8TDW5 730 aaPredicted RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 EPS8L1Q8TE68 723 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 HAUS1Q96CS2 278 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 RIT2Q99578 217 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 C11orf70Q9BRQ4 267 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 INTUQ9ULD6 942 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 BTNL10A8MVZ5 291 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 MMP14P50281 582 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 KRT39Q6A163 491 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 TTC27Q6P3X3 843 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 SUPT20HQ8NEM7 779 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
USP11-204ENST00000377107 AGO4Q9HCK5 861 aaKnown RBP13.87□□□□□ -0.19
USP11-204ENST00000377107 A6NNZ2 444 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 PEX10O60683 326 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ICAM1P05362 532 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 CYP11B1P15538 503 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 LIG4P49917 911 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 PPATQ06203 517 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 FAM133BQ5BKY9 247 aaKnown RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 MCF2L2Q86YR7 1114 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ATP8B4Q8TF62 1192 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 KIFAP3Q92845 792 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 TMEM143Q96AN5 459 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 PRMT1Q99873 361 aaKnown RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 DDX23Q9BUQ8 820 aaKnown RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 DMAC2Q9NW81 257 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 COL24A1Q17RW2 1714 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 PI4K2BG5E9Z4 385 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 RASGRF2O14827 1237 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ZBED4O75132 1171 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 RARAP10276 462 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 RWDD2BP57060 319 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ACTN3Q08043 901 aaPredicted RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 SAMD7Q7Z3H4 446 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 RNF25Q96BH1 459 aaPredicted RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 WNK4Q96J92 1243 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 DDX20Q9UHI6 824 aaKnown RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 SLC26A4O43511 780 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 PHF2O75151 1096 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ECEL1O95672 775 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 EGFRP00533 1210 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 HNRNPH1P31943 449 aaKnown RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 RASGEF1CQ8N431 466 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 JDP2Q8WYK2 163 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 ACSF2Q96CM8 615 aaPredicted RBP13.86□□□□□ -0.19
USP11-204ENST00000377107 RNF146Q9NTX7 359 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 TBX20Q9UMR3 447 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 MYH11P35749 1972 aa13.86□□□□□ -0.19
USP11-204ENST00000377107 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms