RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 HS2ST1Q7LGA3 356 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 PRELID2Q8N945 189 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 U2AF1L4Q8WU68 220 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 LARP4BQ92615 738 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 TUBGCP5Q96RT8 1024 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 CADM1Q9BY67 442 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 KRT82Q9NSB4 513 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 ETNK2Q9NVF9 386 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 MYH14Q7Z406 1995 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 HNRNPCL1O60812 293 aaKnown RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 ASLP04424 464 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 TAF1BQ53T94 588 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-201ENST00000374198 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 PHACTR1Q9C0D0 580 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 TBC1D30Q9Y2I9 924 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 ZBTB1Q9Y2K1 713 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 CCDC88AQ3V6T2 1871 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 DUOX1Q9NRD9 1551 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CYP2D7A0A087X1C5 515 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 ANKRD63C9JTQ0 380 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 ALAS1P13196 640 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 SLC9A1P19634 815 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CD151P48509 253 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 KCNH2Q12809 1159 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 DNAJC3Q13217 504 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
PRPF4-201ENST00000374198 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CYP4X1Q8N118 509 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 DTX3LQ8TDB6 740 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 C7orf43Q8WVR3 580 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 ALG3Q92685 438 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 OLFM3Q96PB7 478 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 SLX1AQ9BQ83 275 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 IL1RAPL1Q9NZN1 696 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 HSFX1Q9UBD0 423 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 ADGRA3Q8IWK6 1321 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 NMT2O60551 498 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
PRPF4-201ENST00000374198 OATP04181 439 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 HSPA6P17066 643 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
PRPF4-201ENST00000374198 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 ZBTB38Q8NAP3 1195 aaPredicted RBP13.8□□□□□ -0.2
PRPF4-201ENST00000374198 DDX12PQ92771 950 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
PRPF4-201ENST00000374198 SAR1AQ9NR31 198 aa13.8□□□□□ -0.2
PRPF4-201ENST00000374198 FGFR2P21802 821 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 NEK3P51956 506 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 MAP7Q14244 749 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 TNIP1Q15025 636 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 SRRM1Q8IYB3 904 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 C10orf82Q8WW14 230 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 LENG1Q96BZ8 264 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 PNMA5Q96PV4 448 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 LBHD1Q9BQE6 289 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 NCANO14594 1321 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 ITGA2BP08514 1039 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 FGRP09769 529 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 CTNNA2P26232 953 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 AADACL2Q6P093 401 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 MARK2Q7KZI7 788 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 NAT14Q8WUY8 206 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 STMN2Q93045 179 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 ZFP69BQ9UJL9 534 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 DOCK2Q92608 1830 aa13.79□□□□□ -0.2
PRPF4-201ENST00000374198 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-201ENST00000374198 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 CTNNBL1Q8WYA6 563 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 TMOD4Q9NZQ9 345 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 UMODL1Q5DID0 1318 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 GSC2O15499 205 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 CCDC22O60826 627 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms