RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ZNF662Q6ZS27 426 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 METTL13Q8N6R0 699 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 TTLL6Q8N841 843 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 MRPL4Q9BYD3 311 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 ANKFY1Q9P2R3 1169 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 DOCK2Q92608 1830 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 WNT7AO00755 349 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 GPC4O75487 556 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 SERPINB9P50453 376 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 SNAP25P60880 206 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 KCTD16Q68DU8 428 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 PITPNM3Q9BZ71 974 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 RPA1P27694 616 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 FNTAP49354 379 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 SCG3Q8WXD2 468 aaKnown RBP11.28□□□□□ -0.6
PGK1-201ENST00000373316 KRT35Q92764 455 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 SPATS2LQ9NUQ6 558 aaKnown RBP11.28□□□□□ -0.6
PGK1-201ENST00000373316 PPP1R9AQ9ULJ8 1098 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 POC1B-GALNT4F8VUJ3 575 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 DGAT1O75907 488 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 GDF11O95390 407 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 MAPK6Q16659 721 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 TAF1BQ53T94 588 aaPredicted RBP11.28□□□□□ -0.6
PGK1-201ENST00000373316 PRAMEF18Q5VWM3 479 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
PGK1-201ENST00000373316 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 TEX33O43247 280 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 PPP1R37O75864 691 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
PGK1-201ENST00000373316 SEC23AQ15436 765 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 CENPKQ9BS16 269 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 MAGEB5Q9BZ81 275 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 NSMCE4AQ9NXX6 385 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
PGK1-201ENST00000373316 TYW5A2RUC4 315 aaKnown RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.6
PGK1-201ENST00000373316 KIF1CO43896 1103 aaKnown RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 PSMA2P25787 234 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 SLC16A2P36021 539 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 MDH1P40925 334 aaKnown RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 ESRRGP62508 458 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 TRADDQ15628 312 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 CEP55Q53EZ4 464 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 ICE2Q659A1 982 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 CARD9Q9H257 536 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 ANAPC7Q9UJX3 599 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 OATP04181 439 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 PLS3P13797 630 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 GPC3P51654 580 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 KIF22Q14807 665 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 RBBP5Q15291 538 aaKnown RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 TTBK2Q6IQ55 1244 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 SYT2Q8N9I0 419 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 PLAGL2Q9UPG8 496 aa11.27□□□□□ -0.6
PGK1-201ENST00000373316 APOBEC2Q9Y235 224 aaKnown RBP11.27□□□□□ -0.6
PGK1-201ENST00000373316 ESRRAP11474 423 aaPredicted RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 H2AFXP16104 143 aaPredicted RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 GRIN1Q05586 938 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
PGK1-201ENST00000373316 DYDC2Q96IM9 177 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 SCYL1Q96KG9 808 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 NUP85Q9BW27 656 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 UBN1Q9NPG3 1134 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 PTPN22Q9Y2R2 807 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 IL18RAPO95256 599 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 HOXC6P09630 235 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 CA4P22748 312 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 STAT3P40763 770 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 ECE1P42892 770 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.61
PGK1-201ENST00000373316 ARID5BQ14865 1188 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 KIAA1755Q5JYT7 1200 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 CDKAL1Q5VV42 579 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 VPS39Q96JC1 886 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms