RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ZSCAN9O15535 394 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 HIP1RO75146 1068 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 SHBGP04278 402 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ATP2A2P16615 1042 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 HSPA9P38646 679 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 TMEM62Q0P6H9 643 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 BLMHQ13867 455 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 KYNUQ16719 465 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 APEX2Q9UBZ4 518 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 AGTPBP1Q9UPW5 1226 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 NID2Q14112 1375 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 SPAG7O75391 227 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 EYA4O95677 639 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 CA8P35219 290 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RINT1Q6NUQ1 792 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RNF207Q6ZRF8 634 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 SLC35C1Q96A29 364 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 STK33Q9BYT3 514 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 PPP1R11O60927 126 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 DESP17661 470 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 VAMP7P51809 220 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 XRCC4Q13426 336 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RASIP1Q5U651 963 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 SDCCAG8Q86SQ7 713 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 SYT2Q8N9I0 419 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 FGD4Q96M96 766 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 SUCLA2Q9P2R7 463 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 EML1O00423 815 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 CD19P15391 556 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 NSFP46459 744 aaKnown RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 ITGB3BPQ13352 177 aaPredicted RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 BYSLQ13895 437 aaKnown RBP12.92□□□□□ -0.34
NCDN-202ENST00000373243 RNF220Q5VTB9 566 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 CHURC1Q8WUH1 139 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RUBCNQ92622 972 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 RUNDC3BQ96NL0 473 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 IMPG2Q9BZV3 1241 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.92□□□□□ -0.34
NCDN-202ENST00000373243 GALNT8Q9NY28 637 aa12.92□□□□□ -0.34
NCDN-202ENST00000373243 CALCAP01258 141 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 RHBDL3P58872 404 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 TMC3Q7Z5M5 1100 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
NCDN-202ENST00000373243 MAIP1Q8WWC4 291 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 KRT35Q92764 455 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 UBE2OQ9C0C9 1292 aaKnown RBP12.91□□□□□ -0.34
NCDN-202ENST00000373243 IQCGQ9H095 443 aaKnown RBP12.91□□□□□ -0.34
NCDN-202ENST00000373243 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 F8VZ95 297 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
NCDN-202ENST00000373243 RAD17O75943 681 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 MARCKSL1P49006 195 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 MFAP3P55082 362 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 IRF2BP2Q7Z5L9 587 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 KIFC3Q9BVG8 833 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 C1orf112Q9NSG2 853 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 ANKFY1Q9P2R3 1169 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 A8MUI8 341 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 PI4K2BG5E9Z4 385 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 NT5DC3Q86UY8 548 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 KAT5Q92993 513 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 GANQ9H2C0 597 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
NCDN-202ENST00000373243 MRPL11Q9Y3B7 192 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms