RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SHMT1P34896 483 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ZNF131P52739 623 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 MGAT5Q09328 741 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 RRP1BQ14684 758 aaKnown RBP14.68□□□□□ -0.06
USP49-201ENST00000373006 CROCCP2Q86T23 111 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 SLC13A5Q86YT5 568 aaPredicted RBP14.68□□□□□ -0.06
USP49-201ENST00000373006 ARHGEF19Q8IW93 802 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 CEP120Q8N960 986 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ETNK1Q9HBU6 452 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ARHGEF3Q9NR81 526 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ASIC3Q9UHC3 531 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 MTUS1Q9ULD2 1270 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 TISP43B9A030 160 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 EYA4O95677 639 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 STX2P32856 288 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 RNASELQ05823 741 aaKnown RBP14.68□□□□□ -0.06
USP49-201ENST00000373006 IKQ13123 557 aaPredicted RBP14.68□□□□□ -0.06
USP49-201ENST00000373006 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ANKRD20A3Q5VUR7 823 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 MFSD5Q6N075 450 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 HS2ST1Q7LGA3 356 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 ATG4AQ8WYN0 398 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 RUNDC3BQ96NL0 473 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 OLFML3Q9NRN5 406 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 AGPAT3Q9NRZ7 376 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 SLC5A4Q9NY91 659 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 TP73O15350 636 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ECEL1O95672 775 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 NBPF20Q3BBV1 942 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 RNF207Q6ZRF8 634 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 SRRM1Q8IYB3 904 aaKnown RBP14.67□□□□□ -0.06
USP49-201ENST00000373006 MBOAT7Q96N66 472 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 SGPL1O95470 568 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ALAS1P13196 640 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 HSPA6P17066 643 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 KRT17Q04695 432 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 KIF22Q14807 665 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 CGB2Q6NT52 195 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 FAM178BQ8IXR5 827 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 SYCP3Q8IZU3 236 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ELMO3Q96BJ8 720 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 IFT74Q96LB3 600 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 PARVGQ9HBI0 331 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 RXFP1Q9HBX9 757 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 BATF3Q9NR55 127 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ARFGEF1Q9Y6D6 1849 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 PDHA1P08559 390 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ATP2A2P16615 1042 aaKnown RBP14.67□□□□□ -0.06
USP49-201ENST00000373006 LACTBP83111 547 aaPredicted RBP14.67□□□□□ -0.06
USP49-201ENST00000373006 ATP11AP98196 1134 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 CLUL1Q15846 466 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ODR4Q5SWX8 454 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 C11orf63Q6NUN7 778 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 CKAP2Q8WWK9 683 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 DYDC2Q96IM9 177 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 ROPN1BQ9BZX4 212 aaPredicted RBP14.67□□□□□ -0.06
USP49-201ENST00000373006 ROPN1Q9HAT0 212 aaPredicted RBP14.67□□□□□ -0.06
USP49-201ENST00000373006 GGA1Q9UJY5 639 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 VAV3Q9UKW4 847 aa14.67□□□□□ -0.06
USP49-201ENST00000373006 SPATA31A5Q5VU36 1347 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 SPATA31A7Q8IWB4 1347 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 CHRNB2P17787 502 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 GBP1P32455 592 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 GCLMP48507 274 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 CACNB3P54284 484 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 TCP10Q12799 353 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 SIX1Q15475 284 aaPredicted RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 ZNF720Q7Z2F6 126 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 SLF2Q8IX21 1173 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 GBP7Q8N8V2 638 aaPredicted RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 CRYGNQ8WXF5 182 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 FAM163AQ96GL9 167 aaPredicted RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 KLHL14Q9P2G3 628 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 USP21Q9UK80 565 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 PLIN4Q96Q06 1357 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 GJB6O95452 261 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 BCRP11274 1271 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 CETPP11597 493 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 BFSP1Q12934 665 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 RBBP5Q15291 538 aaKnown RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 FAM196AQ6ZSG2 479 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 TRMT10CQ7L0Y3 403 aaKnown RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 ASRGL1Q7L266 308 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 ECHDC2Q86YB7 292 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 LMO3Q8TAP4 145 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 TMEM237Q96Q45 408 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 FAM118BQ9BPY3 351 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 NUP85Q9BW27 656 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 NKX1-2Q9UD57 310 aaPredicted RBP14.66□□□□□ -0.06
USP49-201ENST00000373006 GAKO14976 1311 aa14.66□□□□□ -0.06
USP49-201ENST00000373006 SLITRK3O94933 977 aa14.65□□□□□ -0.06
USP49-201ENST00000373006 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
USP49-201ENST00000373006 IL1R1P14778 569 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms