RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 FAM50BQ9Y247 325 aa12.15□□□□□ -0.46
EXOSC1-202ENST00000370885 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
EXOSC1-202ENST00000370885 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 ACKR2O00590 384 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PTGESO14684 152 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 DCXO43602 365 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PRKCBP05771 671 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 CNPP09543 421 aaKnown RBP12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 LIG1P18858 919 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 CA8P35219 290 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PRPHP41219 470 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 NAMPTP43490 491 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 OR1G1P47890 313 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 GRIN1Q05586 938 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 CUL4AQ13619 759 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 NAB2Q15742 525 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 RSPH1Q8WYR4 309 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 RPGRIP1Q96KN7 1286 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PLIN2Q99541 437 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 POMKQ9H5K3 350 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 SNTG2Q9NY99 539 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 KANSL3Q9P2N6 904 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 GIT1Q9Y2X7 761 aa12.14□□□□□ -0.47
EXOSC1-202ENST00000370885 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 MEFVO15553 781 aaPredicted RBP12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 HYIQ5T013 277 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 RINT1Q6NUQ1 792 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 DTHD1Q6ZMT9 781 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
EXOSC1-202ENST00000370885 C2orf16Q68DN1 1984 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 MYO10Q9HD67 2058 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 VWA3AA6NCI4 1184 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 LAD1O00515 517 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 C2CD2LO14523 706 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 ABLIM1O14639 778 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 HIP1RO75146 1068 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 RECQL4O94761 1208 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 SOD2P04179 222 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 MYBP10242 640 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 KCNA4P22459 653 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 NPTX2P47972 431 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CLCN4P51793 760 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 PEX3P56589 373 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 NCBP1Q09161 790 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 LARP1BQ659C4 914 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CD300LGQ6UXG3 332 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 ZBTB8OSQ8IWT0 167 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CEP120Q8N960 986 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 DEPTORQ8TB45 409 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CASP10Q92851 521 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 HERC2P3Q9BVR0 1158 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 SMC3Q9UQE7 1217 aa12.12□□□□□ -0.47
EXOSC1-202ENST00000370885 DENND4AQ7Z401 1863 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 PRR33A8MZF0 331 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 H3BQV1 296 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 TEX28O15482 410 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 ALADP13716 330 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 HOXB8P17481 243 aaPredicted RBP12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 MCM2P49736 904 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 MAPK6Q16659 721 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 TMEM119Q4V9L6 283 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 KRT79Q5XKE5 535 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 HFE2Q6ZVN8 426 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 HASPINQ8TF76 798 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 RPS6KC1Q96S38 1066 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 C2orf40Q9H1Z8 148 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 PTPRHQ9HD43 1115 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
EXOSC1-202ENST00000370885 VWA8A3KMH1 1905 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms