RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 VPS11Q9H270 941 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 MYMKA6NI61 221 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 PI4K2BG5E9Z4 385 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 MX2P20592 715 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 PDIA2Q13087 525 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 PDCD6IPQ8WUM4 868 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 C1orf54Q8WWF1 131 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 NSUN2Q08J23 767 aaKnown RBP eCLIP20.87■□□□□ 0.93
LMO4-202ENST00000370544 DRP2Q13474 957 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 SYT2Q8N9I0 419 aaPredicted RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 GANCQ8TET4 914 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 JMJD4Q9H9V9 463 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 PPME1Q9Y570 386 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 FRMPD1Q5SYB0 1578 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 KPNA7A9QM74 516 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 H3BRJ5 948 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 SMARCA1P28370 1054 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 ITPRIPL1Q6GPH6 555 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
LMO4-202ENST00000370544 ZBED8Q8IZ13 594 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 MXD4Q14582 209 aaPredicted RBP20.86■□□□□ 0.93
LMO4-202ENST00000370544 HIBCHQ6NVY1 386 aaPredicted RBP20.86■□□□□ 0.93
LMO4-202ENST00000370544 PPM1NQ8N819 430 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 STK33Q9BYT3 514 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 PIN4Q9Y237 131 aaKnown RBP20.86■□□□□ 0.93
LMO4-202ENST00000370544 ITIH6Q6UXX5 1313 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 NR3C2P08235 984 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 MAGEB5Q9BZ81 275 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 FGFR1OP2Q9NVK5 253 aa20.86■□□□□ 0.93
LMO4-202ENST00000370544 MYBP10242 640 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 LCP1P13796 627 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 FDPSP14324 419 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 CDH6P55285 790 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 DHX34Q14147 1143 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 KIF19Q2TAC6 998 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 C1orf228Q6PIY5 440 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 FAM47EQ6ZV65 393 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 MOCS2O96007 188 aaPredicted RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 SCP2P22307 547 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 SLC1A1P43005 524 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 STYK1Q6J9G0 422 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 TNIP3Q96KP6 325 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 ANGPTL2Q9UKU9 493 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 RPSAP08865 295 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 GCKP35557 465 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 FMO5P49326 533 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 COPS2P61201 443 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 WDR72Q3MJ13 1102 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 RNPC3Q96LT9 517 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 PPARGC1AQ9UBK2 798 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 GPR75-ASB3A0A0A6YYF3 556 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 TNPO2O14787 897 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 ZFXP17010 805 aaPredicted RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 ANGEL2Q5VTE6 544 aaKnown RBP20.85■□□□□ 0.93
LMO4-202ENST00000370544 RASSF3Q86WH2 238 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 ADAMTS13Q76LX8 1427 aa20.85■□□□□ 0.93
LMO4-202ENST00000370544 SNX2O60749 519 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 ACOT2P49753 483 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 STK4Q13043 487 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 HP1BP3Q5SSJ5 553 aaPredicted RBP20.84■□□□□ 0.93
LMO4-202ENST00000370544 IZUMO3Q5VZ72 239 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SMARCAD1Q9H4L7 1026 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SP110Q9HB58 689 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SMIM24O75264 130 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SLC18A3Q16572 532 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 LRRC43Q8N309 656 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 TUBE1Q9UJT0 475 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 PPP2R2AP63151 447 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 PDE1CQ14123 709 aaPredicted RBP20.84■□□□□ 0.93
LMO4-202ENST00000370544 EMC2Q15006 297 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SEPT1Q8WYJ6 367 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 APOBEC2Q9Y235 224 aaKnown RBP20.84■□□□□ 0.93
LMO4-202ENST00000370544 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 MAP3K7O43318 606 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 WDR24Q96S15 920 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 INTUQ9ULD6 942 aa20.84■□□□□ 0.93
LMO4-202ENST00000370544 SPECC1L-ADORA2AF8WAN1 911 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 APOL1O14791 398 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 MGEA5O60502 916 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 APOEP02649 317 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 SNRNP35Q16560 246 aaKnown RBP20.83■□□□□ 0.93
LMO4-202ENST00000370544 TRIM62Q9BVG3 475 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 ADAM21Q9UKJ8 722 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 CTDNEP1O95476 244 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 CPB1P15086 417 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 BTBD8Q5XKL5 378 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 OLA1Q9NTK5 396 aaKnown RBP20.83■□□□□ 0.93
LMO4-202ENST00000370544 ASAP2O43150 1006 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 KRT17Q04695 432 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 KRT33BQ14525 404 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 HSP90AA5PQ58FG0 334 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 ATP11CQ8NB49 1132 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 IL25Q9H293 177 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 TMEM60Q9H2L4 133 aa20.83■□□□□ 0.93
LMO4-202ENST00000370544 AGAP1Q9UPQ3 857 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms