RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ANKFY1Q9P2R3 1169 aa11.5□□□□□ -0.57
EBF3-202ENST00000368648 ANGPTL2Q9UKU9 493 aa11.5□□□□□ -0.57
EBF3-202ENST00000368648 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
EBF3-202ENST00000368648 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 CAPN9O14815 690 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 EPHB6O15197 1021 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PAPOLAP51003 745 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 HMGCS2P54868 508 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PHEXP78562 749 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 GPS1Q13098 491 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NAB2Q15742 525 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NTRK3Q16288 839 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 FERMT1Q9BQL6 677 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 C15orf41Q9Y2V0 281 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 POLGP54098 1239 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 MAP7D3Q8IWC1 876 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PPP1R16BQ96T49 567 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 SEPT10Q9P0V9 454 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 CHMP2BQ9UQN3 213 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 SNUPNO95149 360 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 SHBGP04278 402 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 CCNHP51946 323 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 ELF3P78545 371 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 PDIA2Q13087 525 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 PREPLQ4J6C6 727 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 GALNT17Q6IS24 598 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 MCUQ8NE86 351 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PDZD8Q8NEN9 1154 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 RAD54LQ92698 747 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 TRABDQ9H4I3 376 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 EXOC7Q9UPT5 735 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 REXO2Q9Y3B8 237 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 E2F8A0AVK6 867 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 HNRNPDLO14979 420 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 FANCGO15287 622 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PIAS1O75925 651 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 FSBPO95073 299 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 RFC5P40937 340 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 IZUMO3Q5VZ72 239 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 CCDC125Q86Z20 511 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PPM1NQ8N819 430 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 ATP2A3Q93084 1043 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 HIC2Q96JB3 615 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
EBF3-202ENST00000368648 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
EBF3-202ENST00000368648 SOX11P35716 441 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 PIK3CAP42336 1068 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 THOC5Q13769 683 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 HSP90AA5PQ58FG0 334 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SNRNP48Q6IEG0 339 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 TRAIPQ9BWF2 469 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 ATP6V0A4Q9HBG4 840 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 RGL1Q9NZL6 768 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 PCDHB4Q9Y5E5 795 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SYNGAP1Q96PV0 1343 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 PDE4DIPQ5VU43 2346 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 AGTP01019 485 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 PPM1FP49593 454 aaPredicted RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 ANKRD20A2Q5SQ80 823 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 ANKRD20A1Q5TYW2 823 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 ZNF564Q8TBZ8 553 aaPredicted RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 SCYL1Q96KG9 808 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SLC4A9Q96Q91 983 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SUGT1Q9Y2Z0 365 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 ALG6Q9Y672 507 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 CSPG5O95196 566 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 GPC5P78333 572 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
EBF3-202ENST00000368648 TRMT10CQ7L0Y3 403 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms