RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PRELID2Q8N945 189 aa19.48■□□□□ 0.71
UBQLN4-201ENST00000368309 C1orf131Q8NDD1 294 aaKnown RBP19.48■□□□□ 0.71
UBQLN4-201ENST00000368309 TATDN2Q93075 761 aa19.48■□□□□ 0.71
UBQLN4-201ENST00000368309 IWS1Q96ST2 819 aa19.48■□□□□ 0.71
UBQLN4-201ENST00000368309 GABBR1Q9UBS5 961 aa19.48■□□□□ 0.71
UBQLN4-201ENST00000368309 ZBED4O75132 1171 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 POMGNT1Q8WZA1 660 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 NUP85Q9BW27 656 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 FZD1Q9UP38 647 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 IFFO1Q0D2I5 559 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 RUFY4Q6ZNE9 571 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 E7EVH7 732 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 CYP11B1P15538 503 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 LIG3P49916 1009 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 PEX5P50542 639 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 JAK3P52333 1124 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 CIAPIN1Q6FI81 312 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 C11orf63Q6NUN7 778 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 NLRX1Q86UT6 975 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 FBXO25Q8TCJ0 367 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 HELQQ8TDG4 1101 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 SHC3Q92529 594 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 EXOC7Q9UPT5 735 aa19.47■□□□□ 0.71
UBQLN4-201ENST00000368309 SPOPO43791 374 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 ZNF862O60290 1169 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 HADHBP55084 474 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 KRT76Q01546 638 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 SLC39A4Q6P5W5 647 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 PHLDB2Q86SQ0 1253 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 TMEM174Q8WUU8 243 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 CCT8L2Q96SF2 557 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 MIF4GDA9UHW6 222 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 MAGOHP61326 146 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 GHRHRQ02643 423 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 SF3B2Q13435 895 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 TTC27Q6P3X3 843 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 ZNF564Q8TBZ8 553 aaPredicted RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 ZNF653Q96CK0 615 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 CAMKK2Q96RR4 588 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 RNF146Q9NTX7 359 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 ZDHHC18Q9NUE0 388 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 CNOT8Q9UFF9 292 aaKnown RBP19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 PCDHA10Q9Y5I2 948 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 PFASO15067 1338 aa19.46■□□□□ 0.71
UBQLN4-201ENST00000368309 VWA5AO00534 786 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 PRAMEF18Q5VWM3 479 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SAMD7Q7Z3H4 446 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 MAP4K3Q8IVH8 894 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 VTI1AQ96AJ9 217 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 ANKEF1Q9NU02 776 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 RAB20Q9NX57 234 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 PTPN22Q9Y2R2 807 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 KIAA0391O15091 583 aaKnown RBP19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SHBGP04278 402 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 NR3C2P08235 984 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 GZMAP12544 262 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SWSAP1Q6NVH7 229 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SV2AQ7L0J3 742 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 ADGRA3Q8IWK6 1321 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SYNGAP1Q96PV0 1343 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 MAPK13O15264 365 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 KRT5P13647 590 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 SFNP31947 248 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 KCNJ1P48048 391 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 LMBRD2Q68DH5 695 aaPredicted RBP19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 NLRP14Q86W24 1093 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 MICALL1Q8N3F8 863 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 FBXL13Q8NEE6 735 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 TMEM8AQ9HCN3 771 aa19.45■□□□□ 0.7
UBQLN4-201ENST00000368309 PPFIA2O75334 1257 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 EFCAB13Q8IY85 973 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 UHMK1Q8TAS1 419 aaKnown RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 ZNF473Q8WTR7 871 aaKnown RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 NT5C1BQ96P26 610 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 HNRNPDLO14979 420 aaKnown RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 CTNND1O60716 968 aaKnown RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 PHF2O75151 1096 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 PTGIRP43119 386 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 BIRC3Q13489 604 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 PPP2R5EQ16537 467 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 NBPF12Q5TAG4 269 aaPredicted RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 CCDC137Q6PK04 289 aaKnown RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 VSIG10LQ86VR7 867 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 ARFGAP2Q8N6H7 521 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 RPS6KC1Q96S38 1066 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 FAM213AQ9BRX8 229 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 TIPINQ9BVW5 301 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 ERLIN2O94905 339 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 SEL1L2Q5TEA6 688 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 MYCBPAPQ8TBZ2 947 aa19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 ZKSCAN4Q969J2 545 aaPredicted RBP19.44■□□□□ 0.7
UBQLN4-201ENST00000368309 FAM187AA6NFU0 413 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 PDE6CP51160 858 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 SNRPFP62306 86 aaKnown RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 DHX34Q14147 1143 aaKnown RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 C2CD6Q53TS8 623 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 UBAP2Q5T6F2 1119 aaKnown RBP19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 ZDHHC24Q6UX98 284 aa19.43■□□□□ 0.7
UBQLN4-201ENST00000368309 PACS2Q86VP3 889 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms