RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 NRIP1P48552 1158 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 SMAD4Q13485 552 aaKnown RBP12.39□□□□□ -0.43
H3F3A-203ENST00000366815 CLUL1Q15846 466 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 TWF2Q6IBS0 349 aaKnown RBP12.39□□□□□ -0.43
H3F3A-203ENST00000366815 OTUD6AQ7L8S5 288 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 CATSPER4Q7RTX7 472 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 TPH2Q8IWU9 490 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 PSPC1Q8WXF1 523 aaKnown RBP12.39□□□□□ -0.43
H3F3A-203ENST00000366815 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
H3F3A-203ENST00000366815 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
H3F3A-203ENST00000366815 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 C11orf16Q9NQ32 467 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 CD207Q9UJ71 328 aa12.39□□□□□ -0.43
H3F3A-203ENST00000366815 MEIS3P2A8K0S8 358 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
H3F3A-203ENST00000366815 PPM1AP35813 382 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 TXKP42681 527 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 NDUFV1P49821 464 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 RAB27AP51159 221 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 COASYQ13057 564 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 KCNC3Q14003 757 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 DUSP6Q16828 381 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 PDE12Q6L8Q7 609 aaKnown RBP12.38□□□□□ -0.43
H3F3A-203ENST00000366815 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 SRGAP1Q7Z6B7 1085 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 RBM23Q86U06 439 aaKnown RBP12.38□□□□□ -0.43
H3F3A-203ENST00000366815 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 ADHFE1Q8IWW8 467 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 SMRP1Q8NCR6 262 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 VN1R2Q8NFZ6 395 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 RSPH1Q8WYR4 309 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 LPPQ93052 612 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 MRPL9Q9BYD2 267 aaKnown RBP12.38□□□□□ -0.43
H3F3A-203ENST00000366815 TLE6Q9H808 572 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 SPG21Q9NZD8 308 aa12.38□□□□□ -0.43
H3F3A-203ENST00000366815 PER2O15055 1255 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 ASAP2O43150 1006 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 SKIP12755 728 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 RARRES1P49788 294 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
H3F3A-203ENST00000366815 UBXN11Q5T124 520 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 RNF149Q8NC42 400 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 ZSCAN31Q96LW9 406 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-203ENST00000366815 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-203ENST00000366815 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 ANKEF1Q9NU02 776 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 STK17AQ9UEE5 414 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-203ENST00000366815 PCDHB2Q9Y5E7 798 aa12.37□□□□□ -0.43
H3F3A-203ENST00000366815 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 HIDE1A8MVS5 230 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 OFD1O75665 1012 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 MCM7P33993 719 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 BCAR1P56945 870 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 PTENP60484 403 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 HMGN5P82970 282 aaKnown RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 PLPP4Q5VZY2 271 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 GLB1LQ6UWU2 654 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 TMEM184AQ6ZMB5 413 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 MRPL10Q7Z7H8 261 aaKnown RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 TCF25Q9BQ70 676 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 LRFN3Q9BTN0 628 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 FOXP1Q9H334 677 aaPredicted RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 NGRNQ9NPE2 291 aaKnown RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 SH2B1Q9NRF2 756 aaPredicted RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 TBC1D13Q9NVG8 400 aa12.36□□□□□ -0.43
H3F3A-203ENST00000366815 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
H3F3A-203ENST00000366815 A0A087WWV3 80 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 NT5C1B-RDH14C9J2C7 533 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 B4GALT3O60512 393 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 FBXO45P0C2W1 286 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 ARL2P36404 184 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 KRT17Q04695 432 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms