RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 FBXO25Q8TCJ0 367 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 FBF1Q8TES7 1133 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 LPAR1Q92633 364 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 KIAA1683Q9H0B3 1180 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 TXLNGQ9NUQ3 528 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 GRHL1Q9NZI5 618 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 TRAF3IP3Q9Y228 551 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PCDHA1Q9Y5I3 950 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 RIPK2O43353 540 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 POTEIP0CG38 1075 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PEX19P40855 299 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 AUHQ13825 339 aaKnown RBP20.44■□□□□ 0.86
CMTM3-201ENST00000361909 SUPT20HL1Q3ZLR7 823 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 POTEEQ6S8J3 1075 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 MFN1Q8IWA4 741 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 SCFD1Q8WVM8 642 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PSTPIP2Q9H939 334 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 EMILIN3Q9NT22 766 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PRKAG3Q9UGI9 489 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 POTEMA6NI47 508 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 MIF4GDA9UHW6 222 aaKnown RBP20.43■□□□□ 0.86
CMTM3-201ENST00000361909 NR2F2P24468 414 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 PLS1Q14651 629 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 KCNK18Q7Z418 384 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 FBXO11Q86XK2 927 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 LMNTD2Q8IXW0 634 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 PROCA1Q8NCQ7 364 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-201ENST00000361909 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
CMTM3-201ENST00000361909 CTNNBL1Q8WYA6 563 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-201ENST00000361909 SERPINB12Q96P63 405 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 OSBPL1AQ9BXW6 950 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 BIN2Q9UBW5 565 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-201ENST00000361909 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 LRRC42Q9Y546 428 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
CMTM3-201ENST00000361909 DDX3XO00571 662 aaKnown RBP eCLIP20.42■□□□□ 0.862e-10■■■□□ 18.2
CMTM3-201ENST00000361909 SLC16A3O15427 465 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 XRCC5P13010 732 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 IFNAR2P48551 515 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 GALCP54803 685 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 HADHBP55084 474 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 CYFIP1Q7L576 1253 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SCYL3Q8IZE3 742 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SH3TC2Q8TF17 1288 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 NAP1L4Q99733 375 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 RPL26L1Q9UNX3 145 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 EVI5O60447 810 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SLC9A1P19634 815 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 PTGIRP43119 386 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 LBRQ14739 615 aaKnown RBP20.42■□□□□ 0.86
CMTM3-201ENST00000361909 EPHA7Q15375 998 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SGSM1Q2NKQ1 1148 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 DCAF12L1Q5VU92 463 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SLC30A9Q6PML9 568 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SLC30A5Q8TAD4 765 aa20.42■□□□□ 0.86
CMTM3-201ENST00000361909 SLC37A4O43826 429 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 LINGO3P0C6S8 592 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 STAT1P42224 750 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 SPDYE1Q8NFV5 336 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 U2AF1L4Q8WU68 220 aaKnown RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 CKAP2Q8WWK9 683 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 WDR18Q9BV38 432 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 FGFR1OP2Q9NVK5 253 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 KLHL14Q9P2G3 628 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 SNX24Q9Y343 169 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 TCP11X1B4DZS4 312 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 WDR46O15213 610 aaKnown RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 UNC5CO95185 931 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 NPTXRO95502 500 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 ACTN1P12814 892 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 NELFCDQ8IXH7 590 aa20.41■□□□□ 0.86
CMTM3-201ENST00000361909 AGGF1Q8N302 714 aaeCLIP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 EPS8L3Q8TE67 593 aaKnown RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
CMTM3-201ENST00000361909 EME2A4GXA9 379 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-201ENST00000361909 CALUO43852 315 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-201ENST00000361909 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 ALAS1P13196 640 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 VCAM1P19320 739 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 RNF217Q8TC41 542 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 ZFAND2BQ8WV99 257 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 PRCCQ92733 491 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-201ENST00000361909 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 RANBP17Q9H2T7 1088 aaKnown RBP20.4■□□□□ 0.86
CMTM3-201ENST00000361909 SEMA4AQ9H3S1 761 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 RNPEPL1Q9HAU8 725 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 AS3MTQ9HBK9 375 aa20.4■□□□□ 0.86
CMTM3-201ENST00000361909 ATP4AP20648 1035 aa20.39■□□□□ 0.86
CMTM3-201ENST00000361909 CTNNA2P26232 953 aa20.39■□□□□ 0.86
CMTM3-201ENST00000361909 PRPF4BQ13523 1007 aaKnown RBP20.39■□□□□ 0.86
CMTM3-201ENST00000361909 PDCD2Q16342 344 aaPredicted RBP20.39■□□□□ 0.86
CMTM3-201ENST00000361909 HERC4Q5GLZ8 1057 aaPredicted RBP20.39■□□□□ 0.86
CMTM3-201ENST00000361909 NUGGCQ68CJ6 796 aa20.39■□□□□ 0.86
CMTM3-201ENST00000361909 C11orf63Q6NUN7 778 aa20.39■□□□□ 0.86
CMTM3-201ENST00000361909 EXOC3L1Q86VI1 746 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms