RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MYLK4Q86YV6 388 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 RBBP8NLQ8NC74 664 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 EPB41L4BQ9H329 900 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 USP40Q9NVE5 1235 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 PFASO15067 1338 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 SMAPO00193 183 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 DLATP10515 647 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 PTENP60484 403 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 PSMC6P62333 389 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 MDH1BQ5I0G3 518 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 ARHGEF18Q6ZSZ5 1173 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 KRT35Q92764 455 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 SMC6Q96SB8 1091 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 ZFP69BQ9UJL9 534 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 DNM3Q9UQ16 869 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 RBAK-RBAKDNI3L0D1 243 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 MAP3K7O43318 606 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 PCP11498 1178 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 MTM1Q13496 603 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 ALG3Q92685 438 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 SUCLA2Q9P2R7 463 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 NPTXRO95502 500 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 VHLP40337 213 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 DYNC1I2Q13409 638 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 GALNTL6Q49A17 601 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 AGGF1Q8N302 714 aaeCLIP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 BTBD6Q96KE9 485 aa13.57□□□□□ -0.24
VAMP1-201ENST00000361716 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.57□□□□□ -0.24
VAMP1-201ENST00000361716 MYH1P12882 1939 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 HNRNPRO43390 633 aaKnown RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 PIAS1O75925 651 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 NUDT17P0C025 328 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 AKR1B1P15121 316 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ADCY8P40145 1251 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 GALNT17Q6IS24 598 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ARHGEF26Q96DR7 871 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 MXD3Q9BW11 206 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 VCX3BQ9H321 246 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 MAGEF1Q9HAY2 307 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 PHTF1Q9UMS5 762 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 LRRC42Q9Y546 428 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 PVALEFA0A1B0GWK0 134 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 GYG2O15488 501 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ATP5DP30049 168 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 STRN3Q13033 797 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 DSTYKQ6XUX3 929 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 CFAP61Q8NHU2 1237 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 RBM46Q8TBY0 533 aaKnown RBP13.56□□□□□ -0.24
VAMP1-201ENST00000361716 ANKRD2Q9GZV1 360 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 CARD9Q9H257 536 aa13.56□□□□□ -0.24
VAMP1-201ENST00000361716 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 CA4P22748 312 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 GSTO1P78417 241 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 DCAF12L1Q5VU92 463 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 IRF2BP2Q7Z5L9 587 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 UBL4BQ8N7F7 174 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ASAP3Q8TDY4 903 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ATG4AQ8WYN0 398 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 EDEM3Q9BZQ6 932 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 TAS2R14Q9NYV8 317 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ITGB4P16144 1822 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 BAZ2AQ9UIF9 1905 aaKnown RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 EXOC3O60645 756 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 GNAZP19086 355 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms