RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 AGAP1Q9UPQ3 857 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 SLC30A1Q9Y6M5 507 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 E9PMD0 336 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 MAP3K13O43283 966 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 TMEM132DQ14C87 1099 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 MTFR1Q15390 333 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 LRRC8AQ8IWT6 810 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 PDLIM2Q96JY6 352 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 VPS11Q9H270 941 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 XAB2Q9HCS7 855 aaKnown RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 PCSK1NQ9UHG2 260 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 KCNQ2O43526 872 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 LCP1P13796 627 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 FOXD4Q12950 439 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 KCNB1Q14721 858 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 KRT80Q6KB66 452 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 AGBL3Q8NEM8 1001 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 CEP19Q96LK0 163 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 ERAP1Q9NZ08 941 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 SYNMO15061 1565 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 RNASEH1O60930 286 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SERPIND1P05546 499 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MMP14P50281 582 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MORF4L2Q15014 288 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SLC44A5Q8NCS7 719 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MORC4Q8TE76 937 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ABHD8Q96I13 439 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 FMO2Q99518 471 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SAYSD1Q9NPB0 183 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MAFGO15525 162 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 CTNND1O60716 968 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 IRAK1BP1Q5VVH5 260 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TRMT10CQ7L0Y3 403 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 GRAMD1CQ8IYS0 662 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 EIF2AK1Q9BQI3 630 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TRIM33Q9UPN9 1127 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 HBP1O60381 514 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SRGAP2O75044 1071 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 YWHABP31946 246 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ROR1Q01973 937 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MAPRE1Q15691 268 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ALX1Q15699 326 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 C6orf118Q5T5N4 469 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 XRRA1Q6P2D8 792 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 LCA5Q86VQ0 697 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 BARHL2Q9NY43 387 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SPDYE5A6NIY4 337 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SLC8A1P32418 973 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ADCY2Q08462 1091 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SPDYE7PQ495Y7 208 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TEDDM1Q5T9Z0 273 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PPHLN1Q8NEY8 458 aaKnown RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PLEKHF1Q96S99 279 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 MYOZ2Q9NPC6 264 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 WDR35Q9P2L0 1181 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 FAF1Q9UNN5 650 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SNX9Q9Y5X1 595 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 KDM6BO15054 1643 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 C17orf102A2RUQ5 167 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 POTECB2RU33 542 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 NR3C2P08235 984 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 AKR1B1P15121 316 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 VEGFAP15692 232 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 KCNA2P16389 499 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 DPEP1P16444 411 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 CDC25BP30305 580 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 CYP2C19P33261 490 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 TMPRSS15P98073 1019 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 COASYQ13057 564 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ZKSCAN8Q15776 578 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 IL31Q6EBC2 164 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PKN3Q6P5Z2 889 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PID1Q7Z2X4 250 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 NT5DC4Q86YG4 428 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 BCAS4Q8TDM0 211 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 RAPGEF5Q92565 580 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 RABGGTAQ92696 567 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 ENTPD7Q9NQZ7 604 aa11.6□□□□□ -0.55
CLIP1-203ENST00000361654 SCHIP1Q9P0W5 487 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-203ENST00000361654 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ENC1O14682 589 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ORC4O43929 436 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 IL18RAPO95256 599 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 CAPZA2P47755 286 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SLC15A2Q16348 729 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 WDR72Q3MJ13 1102 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ANKRD40Q6AI12 368 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms