RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 BEST2Q8NFU1 509 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 DTX3LQ8TDB6 740 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 MMP19Q99542 508 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 UNC45AQ9H3U1 944 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 CHORDC1Q9UHD1 332 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-203ENST00000361391 IP6K2Q9UHH9 426 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 AURKCQ9UQB9 309 aa8.55□□□□□ -1.04
CTNND1-203ENST00000361391 SETD1BQ9UPS6 1966 aaKnown RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 UTYO14607 1347 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 TBC1D12O60347 775 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 HMBSP08397 361 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 CDH6P55285 790 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 FOXP4Q8IVH2 680 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 DBR1Q9UK59 544 aaKnown RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 GTPBP10A4D1E9 387 aaKnown RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 KCNN4O15554 427 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ABCD1P33897 745 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 MAGEA9P43362 315 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 DGKHQ86XP1 1220 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 TAF1DQ9H5J8 278 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 MARCOQ9UEW3 520 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 LIMA1Q9UHB6 759 aaKnown RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 TCP11X1B4DZS4 312 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ZBTB7AO95365 584 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 SESN2P58004 480 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 TMEM62Q0P6H9 643 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 SPP2Q13103 211 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 RCSD1Q6JBY9 416 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 PARP9Q8IXQ6 854 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 CD209Q9NNX6 404 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.54□□□□□ -1.049e-8■□□□□ 10.6
CTNND1-203ENST00000361391 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 TMEM247A6NEH6 219 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 CYP27B1O15528 508 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ASNSP08243 561 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-203ENST00000361391 SULT1E1P49888 294 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 CYTH1Q15438 398 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 ZFYVE19Q96K21 471 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 MXD3Q9BW11 206 aa8.54□□□□□ -1.04
CTNND1-203ENST00000361391 SUPT3HO75486 399 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 SMARCA1P28370 1054 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PPARGP37231 505 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 NLRP11P59045 1033 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PGBD4Q96DM1 585 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 TRPC7Q9HCX4 862 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 TFR2Q9UP52 801 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PTCH1Q13635 1447 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 MIF4GDA9UHW6 222 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 MYBP10242 640 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 AKR1B1P15121 316 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 QARSP47897 775 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PRAMEP78395 509 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 TNFAIP2Q03169 654 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 LRRC31Q6UY01 552 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 GPD1LQ8N335 351 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 RMDN1Q96DB5 314 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 ATP6V1G3Q96LB4 118 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 CHP1Q99653 195 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 CYP26B1Q9NR63 512 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 ZCCHC11Q5TAX3 1644 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 GSG1L2A8MUP6 293 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 GRAP2O75791 330 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 CPB1P15086 417 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 KCNA2P16389 499 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 COPB2P35606 906 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 ACOT2P49753 483 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 VSNL1P62760 191 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 AP2B1P63010 937 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 FMR1Q06787 632 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■■■□ 23.3
CTNND1-203ENST00000361391 PDXDC1Q6P996 788 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 SRBD1Q8N5C6 995 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 SCG3Q8WXD2 468 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 SH3KBP1Q96B97 665 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 ARHGAP26Q9UNA1 814 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 TRIM33Q9UPN9 1127 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 COL15A1P39059 1388 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 APOL1O14791 398 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 SERPIND1P05546 499 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 IRF1P10914 325 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 BCAR1P56945 870 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 EIF3EP60228 445 aaKnown RBP8.53□□□□□ -1.04
CTNND1-203ENST00000361391 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 C11orf74Q86VG3 221 aa8.53□□□□□ -1.04
CTNND1-203ENST00000361391 PROM2Q8N271 834 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms