RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 FAM187AA6NFU0 413 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 MEIS1O00470 390 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 CHKAP35790 457 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 STAT3P40763 770 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 VPS41P49754 854 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.317e-33■■□□□ 11.8
RBM39-203ENST00000361162 CCNG1P51959 295 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 ROR2Q01974 943 aaKnown RBP13.11□□□□□ -0.31
RBM39-203ENST00000361162 USP4Q13107 963 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 LAMB3Q13751 1172 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
RBM39-203ENST00000361162 EPAS1Q99814 870 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 ZNF287Q9HBT7 754 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 SLCO1B3Q9NPD5 702 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
RBM39-203ENST00000361162 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 VCAM1P19320 739 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
RBM39-203ENST00000361162 RANBP1P43487 201 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 PPATQ06203 517 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 ARHGAP44Q17R89 818 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
RBM39-203ENST00000361162 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 DNAJC9Q8WXX5 260 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TBC1D10AQ9BXI6 508 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 SPAG7O75391 227 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 CETPP11597 493 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 RARGP13631 454 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 CCNB1P14635 433 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 RHBDL3P58872 404 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 KLC1Q07866 573 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 EPHA7Q15375 998 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 MUM1Q2TAK8 710 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TBC1D25Q3MII6 688 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TNFAIP8L3Q5GJ75 292 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TEX9Q8N6V9 391 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 HAS1Q92839 578 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
RBM39-203ENST00000361162 CARD9Q9H257 536 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
RBM39-203ENST00000361162 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
RBM39-203ENST00000361162 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 PRKCIP41743 596 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 STAT1P42224 750 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 DHX34Q14147 1143 aaKnown RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 GALNT15Q8N3T1 639 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 TTC7AQ9ULT0 858 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 PHF2O75151 1096 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 LRRN2O75325 713 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 HOXD13P35453 343 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 NOVP48745 357 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 MESDQ14696 234 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 ZBED3Q96IU2 234 aaPredicted RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
RBM39-203ENST00000361162 TRIM4Q9C037 500 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
RBM39-203ENST00000361162 A0A0A6YYK5 440 aaPredicted RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 SMAPO00193 183 aa13.08□□□□□ -0.31
RBM39-203ENST00000361162 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 PYGMP11217 842 aa13.08□□□□□ -0.31
RBM39-203ENST00000361162 CYP11B2P19099 503 aa13.08□□□□□ -0.31
RBM39-203ENST00000361162 MARSP56192 900 aaKnown RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 PSMC6P62333 389 aa13.08□□□□□ -0.31
RBM39-203ENST00000361162 MRPS35P82673 323 aaKnown RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 DRAP1Q14919 205 aaPredicted RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 ZC2HC1CQ53FD0 456 aaPredicted RBP13.08□□□□□ -0.31
RBM39-203ENST00000361162 ARSHQ5FYA8 562 aa13.08□□□□□ -0.31
RBM39-203ENST00000361162 FOXB2Q5VYV0 432 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms