RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 CXCL16Q9H2A7 254 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 NKX2-4Q9H2Z4 354 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ELAC1Q9H777 363 aaKnown RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 EXOC1Q9NV70 894 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TMEM161AQ9NX61 479 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 MIOSQ9NXC5 875 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 MAPK8IP1Q9UQF2 711 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 GDAQ9Y2T3 454 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 YBX2Q9Y2T7 364 aaKnown RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 IPPQ9Y573 584 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 FNDC1Q4ZHG4 1894 aaPredicted RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 TBKBP1A7MCY6 615 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 BIN1O00499 593 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 CLIC2O15247 247 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 OFD1O75665 1012 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 RHOBTB3O94955 611 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 PIGRP01833 764 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SKIP12755 728 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 ADSSP30520 456 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 TNFSF9P41273 254 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 LIG4P49917 911 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 OSTNP61366 133 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SMAD3P84022 425 aaKnown RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 PDE4CQ08493 712 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 KCNB1Q14721 858 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 CLLU1OSQ5K130 101 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 ZBTB41Q5SVQ8 909 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 MPZL3Q6UWV2 235 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 LRRC55Q6ZSA7 311 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 FAM43BQ6ZT52 329 aaPredicted RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 THNSL1Q8IYQ7 743 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SMYD4Q8IYR2 804 aaPredicted RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SYCP3Q8IZU3 236 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SLC17A8Q8NDX2 589 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 ZSWIM2Q8NEG5 633 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 HVCN1Q96D96 273 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 PGBD4Q96DM1 585 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 CCDC34Q96HJ3 373 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 LRCH3Q96II8 777 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 YME1L1Q96TA2 773 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 CDT1Q9H211 546 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 NXF3Q9H4D5 531 aaKnown RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 PCIF1Q9H4Z3 704 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 TMEM206Q9H813 350 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 ANKFY1Q9P2R3 1169 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 MSRAQ9UJ68 235 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 HOOK1Q9UJC3 728 aaKnown RBP7.03□□□□□ -1.28
SUDS3-201ENST00000360286 MAN1B1Q9UKM7 699 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 PCDHA11Q9Y5I1 949 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 MYO9BQ13459 2157 aa7.03□□□□□ -1.28
SUDS3-201ENST00000360286 A0A0B4J269 797 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 GOLGA8IPA6NC78 632 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 GOLGA8JA6NMD2 632 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 HNRNPDLO14979 420 aaKnown RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 EIF3DO15371 548 aaKnown RBP eCLIP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CLDN3O15551 220 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 MEFVO15553 781 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 TGFB1I1O43294 461 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 TOM1L1O75674 476 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 SMC2O95347 1197 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 POMCP01189 267 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CA3P07451 260 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 MCF2P10911 925 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 BMP6P22004 513 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 SCP2P22307 547 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ABCD1P33897 745 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 PRCPP42785 496 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 RAB27AP51159 221 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 MCL1Q07820 350 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ALCAMQ13740 583 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 DCAF4L1Q3SXM0 396 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ZNF568Q3ZCX4 644 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ZNF658Q5TYW1 1059 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 STXBP4Q6ZWJ1 553 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ZFP42Q96MM3 310 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 GSDMAQ96QA5 445 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 GAD1Q99259 594 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 ADPGKQ9BRR6 497 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CBWD1Q9BRT8 395 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 MSTO1Q9BUK6 570 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CLSTN2Q9H4D0 955 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CWH43Q9H720 699 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 CERS4Q9HA82 394 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 RSAD1Q9HA92 442 aa7.02□□□□□ -1.29
SUDS3-201ENST00000360286 RC3H2Q9HBD1 1191 aaKnown RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 TYW1Q9NV66 732 aaKnown RBP7.02□□□□□ -1.29
SUDS3-201ENST00000360286 KIAA1468Q9P260 1216 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms