RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ADAMTS5Q9UNA0 930 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 MYH9P35579 1960 aaKnown RBP28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 GOLGA6L10A6NI86 522 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 ZNF862O60290 1169 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 PSAPP07602 524 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 SLC39A4Q6P5W5 647 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 FBXL13Q8NEE6 735 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 HELQQ8TDG4 1101 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 CDHR1Q96JP9 859 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 NT5C1BQ96P26 610 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 ZSWIM1Q9BR11 485 aa28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 CELF4Q9BZC1 486 aaKnown RBP28.4■■■□□ 2.14
CUEDC1-201ENST00000360238 CYP26A1O43174 497 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 DGAT1O75907 488 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 GMPSP49915 693 aaPredicted RBP28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 DHX34Q14147 1143 aaKnown RBP28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 CEP85LQ5SZL2 805 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 SAMD7Q7Z3H4 446 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 RSPH14Q9UHP6 348 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 NR2E1Q9Y466 385 aa28.39■■■□□ 2.14
CUEDC1-201ENST00000360238 FAM187AA6NFU0 413 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 H0YGN5 161 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 ABCD1P33897 745 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 DR1Q01658 176 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 FMO1Q01740 532 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 CYP24A1Q07973 514 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 SLC47A2Q86VL8 602 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 TMBIM4Q9HC24 238 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 PICK1Q9NRD5 415 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 ZNF214Q9UL59 606 aaPredicted RBP28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 NFS1Q9Y697 457 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 PTPRAP18433 802 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 NR1D1P20393 614 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 GARTP22102 1010 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 DSG3P32926 999 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 DNAJC21Q5F1R6 531 aaKnown RBP28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 NAA35Q5VZE5 725 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 PROCA1Q8NCQ7 364 aaPredicted RBP28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 POMGNT1Q8WZA1 660 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 MAF1Q9H063 256 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 JPH1Q9HDC5 661 aaPredicted RBP28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 PDLIM7Q9NR12 457 aa28.38■■■□□ 2.13
CUEDC1-201ENST00000360238 STAM2O75886 525 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 PDE6CP51160 858 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 ZNF211Q13398 564 aaPredicted RBP28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 BRDTQ58F21 947 aaPredicted RBP28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 TMC3Q7Z5M5 1100 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 WNT8AQ9H1J5 351 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 RAB20Q9NX57 234 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 TMOD4Q9NZQ9 345 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 LCTP09848 1927 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 H0YCG3 227 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 ATP2A1O14983 1001 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 RGS20O76081 388 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 GGPS1O95749 300 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 CYP1A2P05177 515 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 CYP11B1P15538 503 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 CTNNA1P35221 906 aaKnown RBP28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 CDR2Q01850 454 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 SPDYCQ5MJ68 293 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 GPD1LQ8N335 351 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 ATP8B4Q8TF62 1192 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 TSPYL1Q9H0U9 437 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 ERVK-5Q9HDB9 667 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 GTF3C4Q9UKN8 822 aa28.37■■■□□ 2.13
CUEDC1-201ENST00000360238 ADGRA3Q8IWK6 1321 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 MYO1CO00159 1063 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 MMEP08473 750 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 POTEAQ6S8J7 498 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 TAS1R2Q8TE23 839 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 TRIM51Q9BSJ1 452 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 ATP6V0A4Q9HBG4 840 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 SLC9A2Q9UBY0 812 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 SIP14410 1827 aa28.36■■■□□ 2.13
CUEDC1-201ENST00000360238 HNRNPDLO14979 420 aaKnown RBP28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 MYZAPP0CAP1 466 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 KRT35Q92764 455 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 CD101Q93033 1021 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 WRNIP1Q96S55 665 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 UVRAGQ9P2Y5 699 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 LCMT1Q9UIC8 334 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 CNOT7Q9UIV1 285 aaKnown RBP28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 FAM170AA1A519 330 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 C19orf81C9J6K1 198 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 PHF2O75151 1096 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 ZC3H11AO75152 810 aaKnown RBP eCLIP28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 COMTP21964 271 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 DUPD1Q68J44 220 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 SWSAP1Q6NVH7 229 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 ENOSF1Q7L5Y1 443 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 EFCAB13Q8IY85 973 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 FAM81BQ96LP2 452 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 POP1Q99575 1024 aaKnown RBP28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 ERP44Q9BS26 406 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 DPH5Q9H2P9 285 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 XPNPEP1Q9NQW7 623 aa28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 TOPORSQ9NS56 1045 aaPredicted RBP28.35■■■□□ 2.13
CUEDC1-201ENST00000360238 CHRNA3P32297 505 aa28.34■■■□□ 2.13
CUEDC1-201ENST00000360238 PEX5P50542 639 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms